RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
TRAIP-209ENST00000488860 TNFRSF14Q92956 283 aa10.05□□□□□ -0.8
TRAIP-209ENST00000488860 ABHD14AQ9BUJ0 271 aa10.05□□□□□ -0.8
TRAIP-209ENST00000488860 GSX1Q9H4S2 264 aaPredicted RBP10.05□□□□□ -0.8
TRAIP-209ENST00000488860 UNKLQ9H9P5 680 aaKnown RBP10.05□□□□□ -0.8
TRAIP-209ENST00000488860 MCUBQ9NWR8 336 aa10.05□□□□□ -0.8
TRAIP-209ENST00000488860 PSG11Q9UQ72 335 aa10.05□□□□□ -0.8
TRAIP-209ENST00000488860 A0A087X0M5 115 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 CENPVL3A0A0U1RRI6 287 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 A0A1B0GX30 115 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 YPEL1O60688 119 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 DIRAS3O95661 229 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 CD74P04233 296 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 TBPP20226 339 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 HNF1AP20823 631 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 AADACP22760 399 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 CD34P28906 385 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 FAUP35544 74 aaKnown RBP10.04□□□□□ -0.8
TRAIP-209ENST00000488860 HERV-K104P61576 105 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 DYRK1AQ13627 763 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 MEF2DQ14814 521 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 SCGB2B2Q4G0G5 96 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 FAM120AOSQ5T036 256 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 BRD3OSQ6XYD6 125 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 C1orf229Q6ZS94 237 aaPredicted RBP10.04□□□□□ -0.8
TRAIP-209ENST00000488860 H1FOOQ8IZA3 346 aaPredicted RBP10.04□□□□□ -0.8
TRAIP-209ENST00000488860 OR10X1Q8NGY0 326 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 OR56B4Q8NH76 319 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
TRAIP-209ENST00000488860 ZNF2Q9BSG1 426 aaPredicted RBP10.04□□□□□ -0.8
TRAIP-209ENST00000488860 ZNF107Q9UII5 783 aaPredicted RBP10.04□□□□□ -0.8
TRAIP-209ENST00000488860 IGHV1-69DA0A0B4J2H0 117 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 DISC1C4P0D8 188 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 J3QR06 171 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 NPFFO15130 113 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 UPK1BO75841 260 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 IGHV1-69P01742 117 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 SRP14P37108 136 aaKnown RBP10.03□□□□□ -0.8
TRAIP-209ENST00000488860 UBE2E1P51965 193 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 PRRX1P54821 245 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 LGALS4P56470 323 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 HLA-DRB5Q30154 266 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 KLF17Q5JT82 389 aaPredicted RBP10.03□□□□□ -0.8
TRAIP-209ENST00000488860 VAX1Q5SQQ9 334 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 ZNF626Q68DY1 528 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 C16orf87Q6PH81 154 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 OVCH2Q7RTZ1 564 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 TMEM17Q86X19 198 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 LYG1Q8N1E2 194 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 ZNF439Q8NDP4 499 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 NANPQ8TBE9 248 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 ZNF596Q8TC21 504 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 EDARADDQ8WWZ3 215 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 TOMM40LQ969M1 308 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 FXYD6Q9H0Q3 95 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 OR2D2Q9H210 308 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 MMP28Q9H239 520 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 HRASLSQ9HDD0 168 aa10.03□□□□□ -0.8
TRAIP-209ENST00000488860 AMMECR1Q9Y4X0 333 aaPredicted RBP10.03□□□□□ -0.8
TRAIP-209ENST00000488860 ANK3Q12955 4377 aaKnown RBP10.02□□□□□ -0.81
TRAIP-209ENST00000488860 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 PPYP01298 95 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 OR8U9P0C7N5 309 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 IL3RAP26951 378 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 SAA4P35542 130 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 RAB7AP51149 207 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.81
TRAIP-209ENST00000488860 ZNF134P52741 427 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 CT45A1Q5HYN5 189 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 SLC25A48Q6ZT89 311 aaKnown RBP10.02□□□□□ -0.81
TRAIP-209ENST00000488860 ARRDC1Q8N5I2 433 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 OR11H6Q8NGC7 330 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 OR4P4Q8NGL7 312 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 OR6F1Q8NGZ6 308 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 OR8U1Q8NH10 309 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 CT45A3Q8NHU0 189 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 SECTM1Q8WVN6 248 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 BORCS5Q969J3 196 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 CREB3L1Q96BA8 519 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 ABHD14BQ96IU4 210 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 SLC6A7Q99884 636 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 C11orf54Q9H0W9 315 aaPredicted RBP10.02□□□□□ -0.81
TRAIP-209ENST00000488860 RNF150Q9ULK6 438 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 OR2W1Q9Y3N9 320 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 CSPG4Q6UVK1 2322 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 TLN2Q9Y4G6 2542 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 HIVEP1P15822 2718 aa10.02□□□□□ -0.81
TRAIP-209ENST00000488860 IGKV1D-13A0A0B4J2D9 117 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 CENPXA8MT69 81 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 TUSC2O75896 110 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 IGLV1-47P01700 117 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 IGKV1-13P0DP09 117 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 PGAM2P15259 253 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 EPHA1P21709 976 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 GPR12P47775 334 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 Q3ZCU0 254 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 PLA1AQ53H76 456 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
TRAIP-209ENST00000488860 LHFPL4Q7Z7J7 247 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms