RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 MEF2BQ02080 365 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-214ENST00000488427 TGM3Q08188 693 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 XKR7Q5GH72 579 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 LRRN1Q6UXK5 716 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 NPSR1Q6W5P4 371 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 CCDC121Q6ZUS5 278 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 MBOAT2Q6ZWT7 520 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 PLCZ1Q86YW0 608 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 PDZD9Q8IXQ8 264 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 TMEM35BQ8NCS4 154 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 OR4A4PQ8NGN8 299 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 SLC38A4Q969I6 547 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 RAD51AP1Q96B01 352 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 EBNA1BP2Q99848 306 aaKnown RBP2.12□□□□□ -2.07
ITGB1-214ENST00000488427 TOLLIPQ9H0E2 274 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 TRABDQ9H4I3 376 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 DHX35Q9H5Z1 703 aaKnown RBP2.12□□□□□ -2.07
ITGB1-214ENST00000488427 ZNF442Q9H7R0 627 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 TMEM27Q9HBJ8 222 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 NEK6Q9HC98 313 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 PAQR5Q9NXK6 330 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-214ENST00000488427 C21orf62Q9NYP8 219 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 TAC3Q9UHF0 121 aa2.12□□□□□ -2.07
ITGB1-214ENST00000488427 IGHV3OR16-8A0A075B7F1 116 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 KCNE1BA0A087WTH5 132 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 IGHV3-49A0A0A0MS15 119 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 IGLV1-36A0A0B4J1U3 117 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 IGHV1-3A0A0C4DH29 117 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 TMEM120BA0PK00 339 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 BTNL10A8MVZ5 291 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 SMKR1H3BMG3 65 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 MANBAO00462 879 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 GATBO75879 557 aaKnown RBP2.11□□□□□ -2.07
ITGB1-214ENST00000488427 IGF2P01344 180 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 FTH1P02794 183 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 OPN1SWP03999 348 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 HLA-DQB2P05538 268 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 CD37P11049 281 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 MPV17P39210 176 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 PRDX1Q06830 199 aaKnown RBP2.11□□□□□ -2.07
ITGB1-214ENST00000488427 ZNF726P1Q15940 193 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 RNASE13Q5GAN3 156 aaKnown RBP2.11□□□□□ -2.07
ITGB1-214ENST00000488427 TEX30Q5JUR7 227 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 C22orf42Q6IC83 251 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 REEP3Q6NUK4 255 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 CYHR1Q6ZMK1 362 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 GLT6D1Q7Z4J2 308 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 GALNT10Q86SR1 603 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 FAM184AQ8NB25 1140 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 UBAC2Q8NBM4 344 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 ZNF680Q8NEM1 530 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 OR51D1Q8NGF3 324 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 OR10D3Q8NH80 312 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 ARL5BQ96KC2 179 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 TRIB3Q96RU7 358 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 C8orf17Q9NRJ1 99 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 ZNF337Q9Y3M9 751 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 TSSC4Q9Y5U2 329 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-214ENST00000488427 LRP1BQ9NZR2 4599 aa2.11□□□□□ -2.07
ITGB1-214ENST00000488427 TCRBV4S1A1TA0A5B7 111 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 OR6C70A6NIJ9 312 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 OR2J3O76001 311 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 ETHE1O95571 254 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 SERPINE2P07093 398 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 HTR1DP28221 377 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 OTX1P32242 354 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-214ENST00000488427 TGFBR1P36897 503 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 DSCR4P56555 118 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-214ENST00000488427 RPS23P62266 143 aaKnown RBP2.1□□□□□ -2.07
ITGB1-214ENST00000488427 RPL23P62829 140 aaKnown RBP2.1□□□□□ -2.07
ITGB1-214ENST00000488427 STX4Q12846 297 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 TPTE2P1Q5T6R2 138 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 Q6ZSR3 168 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 CENPQQ7L2Z9 268 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-214ENST00000488427 C1orf64Q8NEQ6 169 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 OR4C5Q8NGB2 326 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 OR4K17Q8NGC6 315 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 OR1P1Q8NH06 330 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 JOSD2Q8TAC2 188 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 KLF14Q8TD94 323 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-214ENST00000488427 RASD2Q96D21 266 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 PRAP1Q96NZ9 151 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 ZNF649Q9BS31 505 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 ANKRD60Q9BZ19 345 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 OR51M1Q9H341 326 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 FAM96AQ9H5X1 160 aa2.1□□□□□ -2.07
ITGB1-214ENST00000488427 IGHV1-69DA0A0B4J2H0 117 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 IGHV1-18A0A0C4DH31 117 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 IGHV1-69-2A0A0G2JMI3 117 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 PVALEFA0A1B0GWK0 134 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 KRBOX1C9JBD0 128 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 CETN3O15182 167 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 FBP1P09467 338 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 CASP1P29466 404 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 COILP38432 576 aaPredicted RBP2.09□□□□□ -2.07
ITGB1-214ENST00000488427 EVX1P49640 407 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 UBE2E1P51965 193 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 RAB25P57735 213 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 RAB8AP61006 207 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 FGF12P61328 243 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms