RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ARHGAP5-AS1Q96IT6 56 aa18.82■□□□□ 0.6
RNF38-208ENST00000488058 YPEL2Q96QA6 119 aa18.82■□□□□ 0.6
RNF38-208ENST00000488058 YTHDF1Q9BYJ9 559 aaKnown RBP18.82■□□□□ 0.6
RNF38-208ENST00000488058 TCRBV4S1A1TA0A5B7 111 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 ADARB2-AS1A8MUL3 147 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 MOSP00540 346 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 OPN1MWP04001 364 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 OPN1MW2P0DN77 364 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 OPN1MW3P0DN78 364 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 RAB3BP20337 219 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 PLA2G7Q13093 441 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 STEAP3Q658P3 488 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 ZNF880Q6PDB4 577 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 OR2AK2Q8NG84 335 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 OR4F17Q8NGA8 305 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 OR4F4Q96R69 305 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 PECRQ9BY49 303 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 RIMS4Q9H426 269 aaPredicted RBP18.81■□□□□ 0.6
RNF38-208ENST00000488058 HSF4Q9ULV5 492 aa18.81■□□□□ 0.6
RNF38-208ENST00000488058 RRP15Q9Y3B9 282 aaKnown RBP18.81■□□□□ 0.6
RNF38-208ENST00000488058 SMIM30A4D0T7 59 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 PSMB11A5LHX3 300 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 FOXI3A8MTJ6 420 aaPredicted RBP18.8■□□□□ 0.6
RNF38-208ENST00000488058 SERPINE3A8MV23 424 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 LANCL1O43813 399 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 TMEM50BP56557 158 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 CD83Q01151 205 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 SLC35E3Q7Z769 313 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 CMSS1Q9BQ75 279 aaKnown RBP18.8■□□□□ 0.6
RNF38-208ENST00000488058 LINC00527Q9UJ94 153 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 RAB22AQ9UL26 194 aa18.8■□□□□ 0.6
RNF38-208ENST00000488058 IFITM5A6NNB3 132 aa18.79■□□□□ 0.6
RNF38-208ENST00000488058 LDLRAD4O15165 306 aa18.79■□□□□ 0.6
RNF38-208ENST00000488058 HLA-DRB3P79483 266 aa18.79■□□□□ 0.6
RNF38-208ENST00000488058 TCTEX1D4Q5JR98 221 aa18.79■□□□□ 0.6
RNF38-208ENST00000488058 Q8N6K4 173 aa18.79■□□□□ 0.6
RNF38-208ENST00000488058 NOL4LQ96MY1 436 aaPredicted RBP18.79■□□□□ 0.6
RNF38-208ENST00000488058 C12orf4Q9NQ89 552 aa18.79■□□□□ 0.6
RNF38-208ENST00000488058 CMYA5Q8N3K9 4069 aa18.79■□□□□ 0.6
RNF38-208ENST00000488058 A0A0B4J203 849 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 ST8SIA5O15466 376 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 GALP22466 123 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 OR3A3P47888 321 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 LSAMPQ13449 338 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 PLAC9Q5JTB6 97 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 ZNF773Q6PK81 442 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 ZNF329Q86UD4 541 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 ODF3L1Q8IXM7 274 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 Q8N9W7 124 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 RASL11BQ9BPW5 248 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 MRPL20Q9BYC9 149 aaKnown RBP18.78■□□□□ 0.6
RNF38-208ENST00000488058 SLC23A1Q9UHI7 598 aa18.78■□□□□ 0.6
RNF38-208ENST00000488058 TSSC4Q9Y5U2 329 aaPredicted RBP18.78■□□□□ 0.6
RNF38-208ENST00000488058 VWFP04275 2813 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 SAA2-SAA4A0A096LPE2 208 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 TRBV6-6A0A0A6YYG2 114 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 SAA2P0DJI9 122 aaPredicted RBP18.77■□□□□ 0.6
RNF38-208ENST00000488058 PF4V1P10720 104 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 MRPS15P82914 257 aaKnown RBP18.77■□□□□ 0.6
RNF38-208ENST00000488058 LY6G6FQ5SQ64 297 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 FOXRED2Q8IWF2 684 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 CHPT1Q8WUD6 406 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 Q9N2K0 584 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 LIN7CQ9NUP9 197 aaKnown RBP18.77■□□□□ 0.6
RNF38-208ENST00000488058 TXNL4BQ9NX01 149 aaKnown RBP18.77■□□□□ 0.6
RNF38-208ENST00000488058 MGAT4AQ9UM21 535 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 STUB1Q9UNE7 303 aa18.77■□□□□ 0.6
RNF38-208ENST00000488058 A0A075B6Q4 140 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 HSPA12AO43301 675 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 IGHG2P01859 326 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 MOGAT2Q3SYC2 334 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 RAB3CQ96E17 227 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 S1PR3Q99500 378 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 NABP2Q9BQ15 211 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 PARP12Q9H0J9 701 aaKnown RBP18.76■□□□□ 0.59
RNF38-208ENST00000488058 OR1A1Q9P1Q5 309 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 SSR3Q9UNL2 185 aa18.76■□□□□ 0.59
RNF38-208ENST00000488058 LINC01548A6NM66 108 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 G3V4G9 280 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 SCTP09683 121 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 CD3GP09693 182 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 SLC2A2P11168 524 aaPredicted RBP18.75■□□□□ 0.59
RNF38-208ENST00000488058 GADD45AP24522 165 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 F2RL1P55085 397 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 ZNF833PQ6ZTB9 187 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 NR2C2APQ86WQ0 139 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 ABCG5Q9H222 651 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 IFI27L2Q9H2X8 130 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 PLSCR3Q9NRY6 295 aa18.75■□□□□ 0.59
RNF38-208ENST00000488058 PLXNB1O43157 2135 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 ZBTB25P24278 435 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 FGF9P31371 208 aaPredicted RBP18.74■□□□□ 0.59
RNF38-208ENST00000488058 CEACAM6P40199 344 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 GPR12P47775 334 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 SLC35B1P78383 322 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 MMDQ15546 238 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 NEDD8Q15843 81 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 OR8H1Q8NGG4 311 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 OR10R2Q8NGX6 335 aa18.74■□□□□ 0.59
RNF38-208ENST00000488058 OR51E2Q9H255 320 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms