RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ORAI1Q96D31 301 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 NABP2Q9BQ15 211 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 SPACA1Q9HBV2 294 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 MRPS28Q9Y2Q9 187 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 FBXO7Q9Y3I1 522 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 A0A1W2PN81 502 aa14.98□□□□□ -0.01
SMPDL3A-202ENST00000487215 IGHV4-30-4P0DP06 118 aa14.98□□□□□ -0.01
SMPDL3A-202ENST00000487215 CHRNA7P36544 502 aa14.98□□□□□ -0.01
SMPDL3A-202ENST00000487215 TRAT1Q6PIZ9 186 aa14.98□□□□□ -0.01
SMPDL3A-202ENST00000487215 ZNF184Q99676 751 aaPredicted RBP14.98□□□□□ -0.01
SMPDL3A-202ENST00000487215 ABHD14AQ9BUJ0 271 aa14.98□□□□□ -0.01
SMPDL3A-202ENST00000487215 OR2S2Q9NQN1 319 aa14.98□□□□□ -0.01
SMPDL3A-202ENST00000487215 NDUFA3O95167 84 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 MYL12AP19105 171 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 PITPNAQ00169 270 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 RAB12Q6IQ22 244 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 HAPLN4Q86UW8 402 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 Q8N1Y9 231 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 NPBQ8NG41 125 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 OR52L2PQ8NGH6 319 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 APH1BQ8WW43 257 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 CYYR1Q96J86 154 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 CST11Q9H112 138 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 TAF9BQ9HBM6 251 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 SMPD3Q9NY59 655 aaPredicted RBP14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 CKLFQ9UBR5 152 aa14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 FOXA2Q9Y261 457 aaPredicted RBP14.97□□□□□ -0.01
SMPDL3A-202ENST00000487215 IGFBP3P17936 291 aaPredicted RBP14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 PPP1CCP36873 323 aaKnown RBP14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 CRIP2P52943 208 aaPredicted RBP14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 RIPK1Q13546 671 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 GPR176Q14439 515 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 ZNF833PQ6ZTB9 187 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 C5orf24Q7Z6I8 188 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 LYPD6Q86Y78 171 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 OR4C12Q96R67 309 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 C19orf73Q9NVV2 129 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 BABAM2Q9NXR7 383 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 KIAA1456Q9P272 454 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 ERGIC3Q9Y282 383 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 EXOSC1Q9Y3B2 195 aaKnown RBP14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 PEX16Q9Y5Y5 336 aa14.96□□□□□ -0.01
SMPDL3A-202ENST00000487215 A8MZ25 164 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 OGG1O15527 345 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 WBP4O75554 376 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 SC5DO75845 299 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 BAG2O95816 211 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 IGHV3-11P01762 117 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 OR3A3P47888 321 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 VEGFCP49767 419 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 ETV1P50549 477 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 LRRC36Q1X8D7 754 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 OR13C5Q8NGS8 318 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 SMIM19Q96E16 107 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 MBNL3Q9NUK0 354 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 JPT1Q9UK76 154 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 A3GALT2U3KPV4 340 aa14.95□□□□□ -0.02
SMPDL3A-202ENST00000487215 EBAG9O00559 213 aa14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 CA11O75493 328 aa14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 ZNF660Q6AZW8 331 aaPredicted RBP14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 GLIPR1L1Q6UWM5 242 aa14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 TCTEX1D1Q8N7M0 179 aa14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 MUL1Q969V5 352 aa14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 FLYWCH2Q96CP2 140 aaKnown RBP14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 MRPS24Q96EL2 167 aaKnown RBP14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 C8orf4Q9NR00 106 aa14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 DIMT1Q9UNQ2 313 aaKnown RBP14.94□□□□□ -0.02
SMPDL3A-202ENST00000487215 SAA2-SAA4A0A096LPE2 208 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 HSPA12AO43301 675 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 GPX5O75715 221 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 HSPB1P04792 205 aaKnown RBP14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 SAA2P0DJI9 122 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 EGR2P11161 476 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 CX3CL1P78423 397 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 SMN1Q16637 294 aaKnown RBP14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 YIF1BQ5BJH7 314 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 OR2G6Q5TZ20 316 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 TTC23Q5W5X9 447 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 SGPP2Q8IWX5 399 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 SETD9Q8NE22 299 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 TMEM80Q96HE8 168 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 FBXL15Q9H469 300 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 BANF2Q9H503 90 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 KCNIP1Q9NZI2 227 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 NUBP2Q9Y5Y2 271 aa14.93□□□□□ -0.02
SMPDL3A-202ENST00000487215 TRAV8-7A0A075B6U6 113 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 TRBV5-5A0A0J9YX44 114 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 UBE2QL1A1L167 161 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 YPEL1O60688 119 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 IGLV1-51P01701 117 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 HTD2P86397 168 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 Q499Y3 187 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 PYHIN1Q6K0P9 492 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 CD200R1LQ6Q8B3 271 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 FAM131AQ6UXB0 335 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 ZNF554Q86TJ5 538 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 MRPL30Q8TCC3 161 aaKnown RBP14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 ABHD5Q8WTS1 349 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 GHSRQ92847 366 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 YPEL2Q96QA6 119 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms