RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 NTSR1P30989 418 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 CDC34P49427 236 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-209ENST00000487188 BLKP51451 505 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 RPS16P62249 146 aaKnown RBP5.36□□□□□ -1.55
VPS13D-209ENST00000487188 NMSQ5H8A3 153 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 VHLLQ6RSH7 139 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 TMPRSS7Q7RTY8 843 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF721Q8TF20 911 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 ULBP2Q9BZM5 246 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 LOC102725191A0A1B0GVB3 256 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 A6NCN8 305 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 TOX4O94842 621 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 CELA2BP08218 269 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-209ENST00000487188 C1QTNF9P0C862 333 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 PSG2P11465 335 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 CD99P14209 185 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 NPBWR2P48146 333 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 THBS3P49746 956 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SOX8P57073 446 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 GAB4Q2WGN9 574 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SLC25A47Q6Q0C1 308 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 ATOH7Q8N100 152 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 OXGR1Q96P68 337 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SIGLEC12Q96PQ1 595 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 NAT8BQ9UHF3 227 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 MED12Q93074 2177 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 REV3LO60673 3130 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 IGHV3-20A0A0C4DH32 117 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 TRAF3IP2O43734 574 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SPINK4O60575 86 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF253O75346 499 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 NDUFB4O95168 129 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 CTXN2P0C2S0 81 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SSPNQ14714 243 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 STUMQ69YW2 141 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 ERASQ7Z444 233 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 C10orf35Q96D05 121 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 C11orf1Q9H5F2 150 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 TBL2Q9Y4P3 447 aaKnown RBP5.35□□□□□ -1.55
VPS13D-209ENST00000487188 TDRD6O60522 2096 aaKnown RBP5.35□□□□□ -1.55
VPS13D-209ENST00000487188 PDE6DO43924 150 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SCTP09683 121 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 F2RP25116 425 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 PRDX4Q13162 271 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 LDLRAD2Q5SZI1 272 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 OR13H1Q8NG92 308 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 MRGPRDQ8TDS7 321 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SFRP2Q96HF1 295 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 RASL10BQ96S79 203 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 TMEM147Q9BVK8 224 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 TAAR3PQ9P1P4 343 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 RPH3ALQ9UNE2 315 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 PPP1R3CQ9UQK1 317 aa5.35□□□□□ -1.55
VPS13D-209ENST00000487188 COLQQ9Y215 455 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-209ENST00000487188 SLC22A20A6NK97 555 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 SYNGR4O95473 234 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 ANOS1P23352 680 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 PAX9P55771 341 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 SUMO3P55854 103 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-209ENST00000487188 RBM11P57052 281 aaKnown RBP5.34□□□□□ -1.55
VPS13D-209ENST00000487188 MAJINQ3KP22 176 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 FAM69BQ5VUD6 431 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 PRR27Q6MZM9 219 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 Q6ZVH6 145 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 C1orf174Q8IYL3 243 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 RPP25LQ8N5L8 163 aaKnown RBP5.34□□□□□ -1.55
VPS13D-209ENST00000487188 OR10P1Q8NGE3 313 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 PLPPR1Q8TBJ4 325 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 WNT10AQ9GZT5 417 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 COX11Q9Y6N1 276 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 PTPRSQ13332 1948 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 CHD9Q3L8U1 2897 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 PTPRZ1P23471 2315 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-209ENST00000487188 IGKV1D-13A0A0B4J2D9 117 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 PGPEP1LA6NFU8 196 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 AQP7P3A6NL99 342 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 E9PLN8 166 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 K7ERU9 68 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 M0QZ24 198 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 GDF9O60383 454 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 IGKV3-11P04433 115 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 IGKV1-13P0DP09 117 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 DRD1P21728 446 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 RPL15P61313 204 aaKnown RBP5.34□□□□□ -1.55
VPS13D-209ENST00000487188 KCNMB1Q16558 191 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 SNAI3Q3KNW1 292 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 PHYHD1Q5SRE7 291 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 OR4A47Q6IF82 309 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 C7orf61Q8IZ16 206 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 AGBL5Q8NDL9 886 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 NUDT10Q8NFP7 164 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 VWCEQ96DN2 955 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 OR6C1Q96RD1 312 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 MRPL13Q9BYD1 178 aaKnown RBP5.34□□□□□ -1.55
VPS13D-209ENST00000487188 GSX1Q9H4S2 264 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-209ENST00000487188 ELOVL5Q9NYP7 299 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 ARHGAP21Q5T5U3 1957 aa5.34□□□□□ -1.55
VPS13D-209ENST00000487188 WDR1O75083 606 aa5.34□□□□□ -1.56
VPS13D-209ENST00000487188 PGLYRP1O75594 196 aaPredicted RBP5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms