RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SLAMF9Q96A28 289 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 ASB9Q96DX5 294 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 NRBF2Q96F24 287 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 BORCS8Q96FH0 119 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 NSL1Q96IY1 281 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CNN2Q99439 309 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 P2RX4Q99571 388 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF649Q9BS31 505 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CHST5Q9GZS9 411 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CHST6Q9GZX3 395 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 FAM107BQ9H098 131 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 PLEKHA1Q9HB21 404 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 PCDHB16Q9NRJ7 776 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CLN6Q9NWW5 311 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 MRM2Q9UI43 246 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 GTF2A1LQ9UNN4 478 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 MOB4Q9Y3A3 225 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CEPT1Q9Y6K0 416 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 HSPE1-MOB4S4R3N1 261 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TENM2Q9NT68 2774 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TNCP24821 2201 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 A0A1W2PP11 408 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ODAMA1E959 279 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 METTL15A6NJ78 407 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF729A6NN14 1252 aaPredicted RBP3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 SERPINE3A8MV23 424 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 CCL24O00175 119 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 SIRPB1O00241 398 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 LDLRAD4O15165 306 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 FGF16O43320 207 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PRKYO43930 277 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ENTPD6O75354 484 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 SULT1C4O75897 302 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 RPP14O95059 124 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 OR2H2O95918 312 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 FAM107AO95990 144 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 IGHG2P01859 326 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 KRT8P05787 483 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 CSN2P05814 226 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 CCDC159P0C7I6 412 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 OR2T7P0C7T2 308 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 CGB3P0DN86 165 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 CGB7P0DN87 165 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PRKACAP17612 351 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 BCL3P20749 454 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PRKACBP22694 351 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 OR3A1P47881 315 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 MTCP1P56278 107 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 SLC35B1P78383 322 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 AESQ08117 197 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PDZK1IP1Q13113 114 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 KIR2DS1Q14954 304 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PTGES3Q15185 160 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ODF4Q2M2E3 257 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ZFP69Q49AA0 526 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PRAMEF5Q5TYX0 476 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 AADACL4Q5VUY2 407 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 FAHD1Q6P587 224 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 TEX38Q6PEX7 206 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 BAIAP2L2Q6UXY1 529 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PQLC2Q6ZP29 291 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PLEKHG7Q6ZR37 379 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 UTS2BQ765I0 119 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF695Q8IW36 515 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 HS3ST5Q8IZT8 346 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 YIPF7Q8N8F6 280 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF565Q8N9K5 539 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 CHST4Q8NCG5 386 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 KLHL30-AS1Q8NEE0 82 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 OR4D6Q8NGJ1 314 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 OR9G1Q8NH87 305 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 CANT1Q8WVQ1 401 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 RPEQ96AT9 228 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 LINC00479Q96M42 142 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 VGLL1Q99990 258 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 NEURL2Q9BR09 285 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 GON7Q9BXV9 100 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 TTTY10Q9BZA0 68 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 PRRG3Q9BZD7 231 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 COMMD4Q9H0A8 199 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 NCOR1P1Q9H4R4 102 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 LINC00574Q9H8X3 128 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 RHOFQ9HBH0 211 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF286AQ9HBT8 521 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 ADGRL4Q9HBW9 690 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 HMG20AQ9NP66 347 aa3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 EXOSC4Q9NPD3 245 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 RBFOX1Q9NWB1 397 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 WARS2Q9UGM6 360 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-205ENST00000486941 IGKV1-9A0A0C4DH69 117 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 IGKV1-12A0A0C4DH73 117 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 KBTBD11-OT1A0A1B0GTJ5 212 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 A0A1W2PPI3 338 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 A0A1W2PQL4 384 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 J3QR06 171 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 SLC33A1O00400 549 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 VCYO14598 125 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 DEGS1O15121 323 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 ATP8B1O43520 1251 aa3.06□□□□□ -1.92
SNRNP40-205ENST00000486941 FKBP6O75344 327 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms