RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 RNPS1Q15287 305 aaKnown RBP4.55□□□□□ -1.68
COPS3-209ENST00000486810 HLA-BQ31612 363 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 C1orf189Q5VU69 101 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 LYPLAL1Q5VWZ2 237 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 ARL9Q6T311 187 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 Q6ZN92 141 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 C1orf174Q8IYL3 243 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 OSR2Q8N2R0 312 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 OR52R1Q8NGF1 315 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 OR52E2Q8NGJ4 325 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 OR52I1Q8NGK6 324 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 OR2G3Q8NGZ4 309 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 OR52I2Q8NH67 350 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 OR4A16Q8NH70 328 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 RNF138Q8WVD3 245 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 RPEQ96AT9 228 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 LRRC3BQ96PB8 259 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 RHNO1Q9BSD3 238 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 C6orf106Q9H6K1 298 aaPredicted RBP4.55□□□□□ -1.68
COPS3-209ENST00000486810 TBC1D17Q9HA65 648 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 SLC52A3Q9NQ40 469 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 CISD1Q9NZ45 108 aaKnown RBP4.55□□□□□ -1.68
COPS3-209ENST00000486810 THYN1Q9P016 225 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 CCDC167Q9P0B6 97 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 ANXA10Q9UJ72 324 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 VDAC3Q9Y277 283 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 ASF1AQ9Y294 204 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 ZNF646O15015 1829 aaPredicted RBP4.55□□□□□ -1.68
COPS3-209ENST00000486810 QSER1Q2KHR3 1735 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 NUP188Q5SRE5 1749 aa4.55□□□□□ -1.68
COPS3-209ENST00000486810 SBF1O95248 1867 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 A0A1B0GUV1 79 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 A0A1W2PRD5 423 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 ASPDHA6ND91 283 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 A6NDN8 102 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 SHISA7A6NL88 538 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 F5H5K5 113 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 CDC42EP2O14613 210 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 TNFSF11O14788 317 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 TAAR5O14804 337 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 CHST1O43916 411 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 FCN3O75636 299 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 GRAP2O75791 330 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 SOD1P00441 154 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 CD99P14209 185 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 ELK1P19419 428 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 PRKACGP22612 351 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 PRTN3P24158 256 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 HRH1P35367 487 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 TSFMP43897 325 aaKnown RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 CXCL12P48061 93 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 LBX1P52954 281 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 GRB2P62993 217 aaKnown RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 FOXF1Q12946 379 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 MYBPHQ13203 477 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 C1DQ13901 141 aaKnown RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 EXOSC7Q15024 291 aaKnown RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 PMVKQ15126 192 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 IL17AQ16552 155 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 SOHLH1Q5JUK2 328 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 PAPPA-AS1Q5QFB9 102 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 STUMQ69YW2 141 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 ZNF343Q6P1L6 599 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 GLIPR1L1Q6UWM5 242 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 FAM159AQ6UWV7 190 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 C12orf54Q6X4T0 127 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 C18orf65Q6ZTR6 163 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 DET1Q7L5Y6 550 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 PPP1R27Q86WC6 154 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 FAM219AQ8IW50 185 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 TMEM123Q8N131 208 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 KRTCAP2Q8N6L1 136 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 OR2T33Q8NG76 320 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 OR52P1PQ8NH57 321 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 MFSD8Q8NHS3 518 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 ZNF564Q8TBZ8 553 aaPredicted RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 TBL1YQ9BQ87 522 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 ABHD6Q9BV23 337 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 SMIM3Q9BZL3 60 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 SPRY4Q9C004 299 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 WDR61Q9GZS3 305 aaKnown RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 COA1Q9GZY4 146 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 FAM124BQ9H5Z6 455 aaPredicted RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 KCNIP1Q9NZI2 227 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 YARS2Q9Y2Z4 477 aaKnown RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 LSM4Q9Y4Z0 139 aaKnown RBP4.54□□□□□ -1.68
COPS3-209ENST00000486810 IER3IP1Q9Y5U9 82 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 NOTCH4Q99466 2003 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 UBR1Q8IWV7 1749 aa4.54□□□□□ -1.68
COPS3-209ENST00000486810 NRKQ7Z2Y5 1582 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 CCDC88CQ9P219 2028 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 STRCQ7RTU9 1775 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 TINCRA0A1B0GVN0 87 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 A0A1W2PRF3 423 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 A0A1W2PRM7 423 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 TMEM89A2RUT3 159 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 CD300LBA8K4G0 201 aa4.53□□□□□ -1.68
COPS3-209ENST00000486810 FOXI3A8MTJ6 420 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms