RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 PRO1933Q9H354 126 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 HEXA-AS1Q9H8Q6 139 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 ALPK3Q96L96 1907 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 ARG1P05089 322 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 HMGN3Q15651 99 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 RNFT1Q5M7Z0 435 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 Q6ZT83 130 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 TMEM252Q8N6L7 170 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 POC1AQ8NBT0 407 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 NTNG2Q96CW9 530 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 NUDT16L1Q9BRJ7 211 aaKnown RBP11.29□□□□□ -0.6
HMGN1-216ENST00000486741 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-216ENST00000486741 POMT1Q9Y6A1 747 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 TRBV23-1A0A0A0MS06 115 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 CECR9P0C854 216 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 TNFRSF1AP19438 455 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 DVL1P1P54792 670 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-216ENST00000486741 FAM27E3Q08E93 113 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 TMEM187Q14656 261 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 FAM89BQ8N5H3 189 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 SH3BGRL3Q9H299 93 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 AHRRA9YTQ3 701 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 APOA2P02652 100 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 FOXF2Q12947 444 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 ZNF273Q14593 569 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 C4orf17Q53FE4 359 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 C1orf87Q8N0U7 546 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 TAAR6Q96RI8 345 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 COX5BP10606 129 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 SLC25A6P12236 298 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-216ENST00000486741 OR8G5Q8NG78 346 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 NUDT19A8MXV4 375 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 MUC1P15941 1255 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-216ENST00000486741 SSTR5P35346 364 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 QRFPP83859 136 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 CCL13Q99616 98 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 CYB5BO43169 146 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 MRPL41Q8IXM3 137 aaKnown RBP11.28□□□□□ -0.6
HMGN1-216ENST00000486741 FAM24BQ8N5W8 94 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 COMMD5Q9GZQ3 224 aa11.28□□□□□ -0.6
HMGN1-216ENST00000486741 IGKV1D-13A0A0B4J2D9 117 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 MFSD2BA6NFX1 497 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 SMPD2O60906 423 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 MMP7P09237 267 aaPredicted RBP11.27□□□□□ -0.6
HMGN1-216ENST00000486741 IGKV1-13P0DP09 117 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 ZNRF1Q8ND25 227 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 RND1Q92730 232 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 MSI2Q96DH6 328 aaKnown RBP11.27□□□□□ -0.6
HMGN1-216ENST00000486741 SAT2Q96F10 170 aaPredicted RBP11.27□□□□□ -0.6
HMGN1-216ENST00000486741 BOD1Q96IK1 185 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 FBLN5Q9UBX5 448 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 WIPI2Q9Y4P8 454 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 ADAMTS9Q9P2N4 1935 aa11.27□□□□□ -0.6
HMGN1-216ENST00000486741 A0A1W2PRD5 423 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1W2PRF3 423 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1W2PRM7 423 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 CLDN14O95500 239 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 WNT5AP41221 380 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 P2RY6Q15077 328 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 HIST2H3AQ71DI3 136 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 GPR146Q96CH1 333 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 RNF126Q9BV68 326 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.614e-11■■■■■ 27.5
HMGN1-216ENST00000486741 CEP295Q9C0D2 2601 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 XIRP2A4UGR9 3374 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 C16orf97H3BN30 126 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 REG1BP48304 166 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 C22orf15Q8WYQ4 148 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 RSRP1Q9BUV0 290 aa11.27□□□□□ -0.61
HMGN1-216ENST00000486741 RSPO1Q2MKA7 263 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 TLNRD1Q9H1K6 362 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 MYOZ1Q9NP98 299 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 GAB2Q9UQC2 676 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 DENND4AQ7Z401 1863 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 CACNA1AO00555 2505 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 SCGB1D1O95968 90 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 COX5AP20674 150 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 FFAR4Q5NUL3 377 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 SELENOHQ8IZQ5 122 aaKnown RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 MRPS18CQ9Y3D5 142 aaKnown RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 PQLC2LA1A4F0 135 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 NDUFB3O43676 98 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 GYPAP02724 150 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 SUPT4H1P63272 117 aaKnown RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 MRPS11P82912 194 aaKnown RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms