RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CREB3L1Q96BA8 519 aa10.36□□□□□ -0.75
SSR4-211ENST00000486204 GALMQ96C23 342 aa10.36□□□□□ -0.75
SSR4-211ENST00000486204 YPEL2Q96QA6 119 aa10.36□□□□□ -0.75
SSR4-211ENST00000486204 CITED1Q99966 193 aa10.36□□□□□ -0.75
SSR4-211ENST00000486204 OCSTAMPQ9BR26 566 aa10.36□□□□□ -0.75
SSR4-211ENST00000486204 PARP12Q9H0J9 701 aaKnown RBP10.36□□□□□ -0.75
SSR4-211ENST00000486204 MGAT4AQ9UM21 535 aa10.36□□□□□ -0.75
SSR4-211ENST00000486204 TCF19Q9Y242 345 aa10.36□□□□□ -0.75
SSR4-211ENST00000486204 IGKV1D-8A0A087WSZ0 117 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 A0A0A6YYH2 397 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 A6NDX4 124 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 BTBD17A6NE02 478 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 A6NJ64 397 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 HSD17B6O14756 317 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 SSX5O60225 188 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 TMBIM6P55061 237 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 ZNF816Q0VGE8 651 aaPredicted RBP10.35□□□□□ -0.75
SSR4-211ENST00000486204 MADCAM1Q13477 382 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 ARFRP1Q13795 201 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 UBE2NLQ5JXB2 153 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 HACD4Q5VWC8 232 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 Q6ZS49 121 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 ODF3L1Q8IXM7 274 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 SAMD12Q8N8I0 201 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 RAB2BQ8WUD1 216 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 NUDCD2Q8WVJ2 157 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 MAFIPQ8WZ33 124 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 TOMM40LQ969M1 308 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 BCL7BQ9BQE9 202 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 BEX1Q9HBH7 125 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 C1RLQ9NZP8 487 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 OR1A1Q9P1Q5 309 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 ZNF230Q9UIE0 474 aaPredicted RBP10.35□□□□□ -0.75
SSR4-211ENST00000486204 SCOCQ9UIL1 159 aa10.35□□□□□ -0.75
SSR4-211ENST00000486204 TRDCB7Z8K6 153 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 NDUFA7O95182 113 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 EIF4EP06730 217 aaKnown RBP10.34□□□□□ -0.75
SSR4-211ENST00000486204 DTYMKP23919 212 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 HABP2Q14520 560 aaPredicted RBP10.34□□□□□ -0.75
SSR4-211ENST00000486204 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
SSR4-211ENST00000486204 PNLIPRP3Q17RR3 467 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 STEAP3Q658P3 488 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 OR10X1Q8NGY0 326 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 IL1F10Q8WWZ1 152 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 RPEQ96AT9 228 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 CABLES2Q9BTV7 478 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 ABHD14AQ9BUJ0 271 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 IFI27L2Q9H2X8 130 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 ABCB10Q9NRK6 738 aa10.34□□□□□ -0.75
SSR4-211ENST00000486204 TRAV18A0A075B6X5 111 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 FAM90A9PA6NNJ1 464 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 H3BMQ9 156 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 FABP7O15540 132 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 PTHLHP12272 177 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 CD24P25063 80 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 KIR2DS4P43632 304 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 RAB7AP51149 207 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 RORCP51449 518 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 MRPS15P82914 257 aaKnown RBP10.33□□□□□ -0.76
SSR4-211ENST00000486204 KIR2DS1Q14954 304 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 IGSF11Q5DX21 431 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 CCDC144NLQ6NUI1 221 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 LIAT1Q6ZQX7 453 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 Q6ZSV7 163 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 TMEM219Q86XT9 240 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 IZUMO1Q8IYV9 350 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 OR8H3Q8N146 312 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 OR4A4PQ8NGN8 299 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 DYNC2LI1Q8TCX1 351 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 RTN4IP1Q8WWV3 396 aaPredicted RBP10.33□□□□□ -0.76
SSR4-211ENST00000486204 ACOT12Q8WYK0 555 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 ISOC1Q96CN7 298 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 CMTM3Q96MX0 182 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 TOLLIPQ9H0E2 274 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 RBM38Q9H0Z9 239 aaKnown RBP10.33□□□□□ -0.76
SSR4-211ENST00000486204 AUNIPQ9H7T9 357 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 SLC23A1Q9UHI7 598 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 CEPT1Q9Y6K0 416 aa10.33□□□□□ -0.76
SSR4-211ENST00000486204 TRBV6-7A0A0A0MS04 114 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 IGHV1-3A0A0C4DH29 117 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 ITGB1BP1O14713 200 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 XRCC3O43542 346 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 RGS11O94810 467 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 DIRAS3O95661 229 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 APOA1P02647 267 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 GSTT2P0CG29 244 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 GSTT2BP0CG30 244 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 ZNF182P17025 639 aaPredicted RBP10.32□□□□□ -0.76
SSR4-211ENST00000486204 REG1BP48304 166 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 RAG2P55895 527 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 GNG2P59768 71 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 PITPNAQ00169 270 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 DHRS7BQ6IAN0 325 aaPredicted RBP10.32□□□□□ -0.76
SSR4-211ENST00000486204 DRAM1Q8N682 238 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 OR4F5Q8NH21 305 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 OR56B4Q8NH76 319 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 PHF21AQ96BD5 680 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 DIABLOQ9NR28 239 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms