RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RPRMLQ8N4K4 120 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 ZNF615Q8N8J6 731 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 TMEM161BQ8NDZ6 487 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 CCDC112Q8NEF3 446 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 OR51V1Q9H2C8 321 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 TRIM45Q9H8W5 580 aaPredicted RBP2.61□□□□□ -1.99
VPS13A-211ENST00000484581 PSTPIP2Q9H939 334 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 ZNF286AQ9HBT8 521 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 HES4Q9HCC6 221 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 DKKL1Q9UK85 242 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 ALG5Q9Y673 324 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 ICOSQ9Y6W8 199 aa2.61□□□□□ -1.99
VPS13A-211ENST00000484581 C5orf49A4QMS7 147 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 DENRO43583 198 aaKnown RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 ATP5HO75947 161 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 RPP14O95059 124 aaKnown RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 IGKV1D-33P01593 117 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 IGKV1-33P01594 117 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 IGKV3-11P04433 115 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 GYPCP04921 128 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 OR13C7P0DN81 318 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 OR12D1P0DN82 309 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 HIST1H1EP10412 219 aaKnown RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 ZNF32P17041 273 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 CD34P28906 385 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 HSPA9P38646 679 aaKnown RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 RAP1GDS1P52306 607 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 RPS24P62847 133 aaKnown RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 RBX1P62877 108 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 FABP5Q01469 135 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 TMEM176BQ3YBM2 270 aaPredicted RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 DNLZQ5SXM8 178 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 LDLRAD2Q5SZI1 272 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 N4BP2L1Q5TBK1 243 aaPredicted RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 C1orf195Q5TG92 126 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 RASSF6Q6ZTQ3 369 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 SGPP2Q8IWX5 399 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 OR2V1Q8NHB1 315 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 JOSD2Q8TAC2 188 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 ABHD14BQ96IU4 210 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 CCDC42Q96M95 316 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 BCL2L14Q9BZR8 327 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 KCNIP2Q9NS61 270 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 ZNF230Q9UIE0 474 aaPredicted RBP2.6□□□□□ -1.99
VPS13A-211ENST00000484581 HDGFL3Q9Y3E1 203 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 DSCAML1Q8TD84 2053 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 NAV1Q8NEY1 1877 aa2.6□□□□□ -1.99
VPS13A-211ENST00000484581 BAZ1BQ9UIG0 1483 aaKnown RBP2.59□□□□□ -1.99
VPS13A-211ENST00000484581 PRR14LQ5THK1 2151 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 IGKV1OR2-108A0A075B7D4 117 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 TRAV8-1A0A0A6YYK1 113 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 OR6C70A6NIJ9 312 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 K7EQS6 105 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 KCNK1O00180 336 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 STK16O75716 305 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 RBBP9O75884 186 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 ORM2P19652 201 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 SLCO1A2P46721 670 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 TCL1AP56279 114 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 STX5Q13190 355 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 ACSBG2Q5FVE4 666 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 ATP5L2Q7Z4Y8 100 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 GID4Q8IVV7 300 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 BPIFB6Q8NFQ5 453 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 OR1M1Q8NGA1 313 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 MFSD8Q8NHS3 518 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 EEF1AKMT1Q8WVE0 214 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 IL20Q9NYY1 176 aa2.59□□□□□ -1.99
VPS13A-211ENST00000484581 DHCR7Q9UBM7 475 aaKnown RBP2.59□□□□□ -1.99
VPS13A-211ENST00000484581 RPUSD1Q9UJJ7 312 aaKnown RBP2.59□□□□□ -1.99
VPS13A-211ENST00000484581 EVC2Q86UK5 1308 aa2.59□□□□□ -2
VPS13A-211ENST00000484581 KIF26AQ9ULI4 1882 aaPredicted RBP2.58□□□□□ -2
VPS13A-211ENST00000484581 IGLV2-18A0A075B6J9 118 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 IGKV1-12A0A0C4DH73 117 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 H3BMM0 161 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 H3BQ85 93 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 K7EM74 188 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 TRAPPC3O43617 180 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 DEDDO75618 318 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 LYPLA2O95372 231 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 IGKV1D-12P01611 117 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 IGLV3-27P01718 113 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 IFNA16P05015 189 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 RPS17P08708 135 aaKnown RBP2.58□□□□□ -2
VPS13A-211ENST00000484581 CTXN2P0C2S0 81 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 ZNF708P17019 499 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 CDK2P24941 298 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 LINC00313P59037 77 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 AP3S2P59780 193 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 HERVK_113P63121 156 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 JOSD1Q15040 202 aaPredicted RBP2.58□□□□□ -2
VPS13A-211ENST00000484581 PDGFRLQ15198 375 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 HIST3H3Q16695 136 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 LRRC75BQ2VPJ9 315 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 C8orf74Q6P047 294 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 Q6ZQT7 251 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 SLC51BQ86UW2 128 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 Q8WTZ3 238 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 DEDD2Q8WXF8 326 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms