RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 MSMO1Q15800 293 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 ABCA11PQ4W5N1 156 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 AADACL3Q5VUY0 350 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 METTL11BQ5VVY1 283 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 HEPN1Q6WQI6 88 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 CMTM1Q8IZ96 169 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 CCDC71LQ8N9Z2 235 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 OR1L1Q8NH94 360 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 AKR1E2Q96JD6 320 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 YPEL2Q96QA6 119 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 C19orf12Q9NSK7 152 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 RDH8Q9NYR8 311 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 GPR132Q9UNW8 380 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 PPIAL4CA0A0B4J2A2 164 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 IGKV1-6A0A0C4DH72 117 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 ENSAO43768 121 aaKnown RBP11.52□□□□□ -0.57
SMAD9-204ENST00000483941 CRLF1O75462 422 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
SMAD9-204ENST00000483941 PPIAL4GP0DN37 164 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 SPNP16150 400 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 AADACP22760 399 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 CLEC12BQ2HXU8 276 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 ZBTB34Q8NCN2 500 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 OR10V1Q8NGI7 309 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 MARCH1Q8TCQ1 289 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 UPRTQ96BW1 309 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 CYYR1Q96J86 154 aa11.52□□□□□ -0.57
SMAD9-204ENST00000483941 RPUSD1Q9UJJ7 312 aaKnown RBP11.52□□□□□ -0.57
SMAD9-204ENST00000483941 OR5H14A6NHG9 310 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 SNRPGP15A8MWD9 76 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 A8MXK9 166 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 VWC2LB2RUY7 222 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 M0R1W7 72 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 B3GALNT1O75752 331 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 ANXA3P12429 323 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 FXYD4P59646 89 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 TATDN3Q17R31 274 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 TMEM128Q5BJH2 165 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 C1orf122Q6ZSJ8 110 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 TMED4Q7Z7H5 227 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 SLC25A42Q86VD7 318 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 LY6G5BQ8NDX9 201 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 OR2AK2Q8NG84 335 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 CLDND2Q8NHS1 167 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 RFESDQ8TAC1 157 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 TOMM40LQ969M1 308 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 DACT3Q96B18 629 aaPredicted RBP11.51□□□□□ -0.57
SMAD9-204ENST00000483941 SLC5A7Q9GZV3 580 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 GFOD1Q9NXC2 390 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 KCNIP3Q9Y2W7 256 aa11.51□□□□□ -0.57
SMAD9-204ENST00000483941 C17orf98A8MV24 154 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 GPR31O00270 319 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 USF1P22415 310 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-204ENST00000483941 MORN2Q502X0 79 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 C4orf46Q504U0 113 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 BTNL3Q6UXE8 466 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 SGPP2Q8IWX5 399 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 C8orf31Q8N9H6 132 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 OR52L2PQ8NGH6 319 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 RSRP1Q9BUV0 290 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 TMPRSS13Q9BYE2 586 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 NARFLQ9H6Q4 476 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 OR1A1Q9P1Q5 309 aa11.5□□□□□ -0.57
SMAD9-204ENST00000483941 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-204ENST00000483941 CREBL2O60519 120 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-204ENST00000483941 NFYBP25208 207 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 LOXL3P58215 753 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 ERVFRD-1P60508 538 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 LMO4P61968 165 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 ZNF273Q14593 569 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 GLDNQ6ZMI3 551 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-204ENST00000483941 KCTD9Q7L273 389 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 GLCCI1Q86VQ1 547 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 SECTM1Q8WVN6 248 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 TNFRSF14Q92956 283 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 ZNF221Q9UK13 617 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 GAB2Q9UQC2 676 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 VSIG4Q9Y279 399 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 SESN1Q9Y6P5 492 aa11.49□□□□□ -0.57
SMAD9-204ENST00000483941 A0A087X0M5 115 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 TEX13DA0A0J9YY54 714 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-204ENST00000483941 A0A1B0GX30 115 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 PHF1O43189 567 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-204ENST00000483941 OR4E1P0C645 316 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 OR8U9P0C7N5 309 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 AKR1C4P17516 323 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 PPP1CCP36873 323 aaKnown RBP11.48□□□□□ -0.57
SMAD9-204ENST00000483941 PRRX1P54821 245 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 PIGPP57054 158 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 RAB25P57735 213 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 RND3P61587 244 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 LTC4SQ16873 150 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 TCF23Q7RTU1 214 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-204ENST00000483941 BVESQ8NE79 360 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 OR8U1Q8NH10 309 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms