RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 RNASEH2CQ8TDP1 164 aaKnown RBP5.23□□□□□ -1.57
CLK1-212ENST00000482590 HPSE2Q8WWQ2 592 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 TLCD1Q96CP7 247 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 SGTBQ96EQ0 304 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 NSL1Q96IY1 281 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 WFDC6Q9BQY6 131 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 OVOL2Q9BRP0 275 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 RSPO3Q9BXY4 272 aaPredicted RBP5.23□□□□□ -1.57
CLK1-212ENST00000482590 TMBIM4Q9HC24 238 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 KRCC1Q9NPI7 259 aaPredicted RBP5.23□□□□□ -1.57
CLK1-212ENST00000482590 INIPQ9NRY2 104 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 RHBDL2Q9NX52 303 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 EIF3KQ9UBQ5 218 aaKnown RBP5.23□□□□□ -1.57
CLK1-212ENST00000482590 NDUFAF1Q9Y375 327 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 MEGF8Q7Z7M0 2845 aa5.23□□□□□ -1.57
CLK1-212ENST00000482590 hCG_38984A0A1B0GV85 526 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 A0A1W2PPI3 338 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 C5orf49A4QMS7 147 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 TVP23AA6NH52 213 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 OR5B21A6NL26 309 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 TMEM238C9JI98 176 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 SPRY3O43610 288 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 SOX15O60248 233 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 MPDU1O75352 247 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 FOXH1O75593 365 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 TRMUO75648 421 aaKnown RBP5.22□□□□□ -1.57
CLK1-212ENST00000482590 SLC2A10O95528 541 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 IGHV1-46P01743 117 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 IGHV3-13P01766 116 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 ORM1P02763 201 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 MMP7P09237 267 aaPredicted RBP5.22□□□□□ -1.57
CLK1-212ENST00000482590 ZNF32P17041 273 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 MT3P25713 68 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 GUCA1AP43080 201 aaPredicted RBP5.22□□□□□ -1.57
CLK1-212ENST00000482590 UGT2B15P54855 530 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 ZNF85Q03923 595 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 ARL16Q0P5N6 197 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 OR5I1Q13606 314 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 TRIM16LQ309B1 348 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 KRTAP27-1Q3LI81 207 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 ACTL10Q5JWF8 245 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 C10orf128Q5T292 105 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 C9orf139Q6ZV77 190 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 ODF3L1Q8IXM7 274 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 C1orf174Q8IYL3 243 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 GPR32P1Q8NGA4 272 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 SLC25A40Q8TBP6 338 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 FNDC8Q8TC99 324 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 C22orf15Q8WYQ4 148 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 CCL17Q92583 94 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 CEP19Q96LK0 163 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 CGREF1Q99674 301 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 COPS4Q9BT78 406 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 CABLES2Q9BTV7 478 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 SIAEQ9HAT2 523 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 PLCXD1Q9NUJ7 323 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 CLN6Q9NWW5 311 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 NDE1Q9NXR1 346 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 TAS2R5Q9NYW4 299 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 PPP1R3CQ9UQK1 317 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 AP3M1Q9Y2T2 418 aa5.22□□□□□ -1.57
CLK1-212ENST00000482590 ANKRD20A5PA0PJZ0 165 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 H3BSA7 217 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 SLC1A7O00341 560 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 HBE1P02100 147 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 THY1P04216 161 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 C4BPBP20851 252 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 C21orf33P30042 268 aaPredicted RBP5.21□□□□□ -1.58
CLK1-212ENST00000482590 FGF9P31371 208 aaPredicted RBP5.21□□□□□ -1.58
CLK1-212ENST00000482590 TFPI2P48307 235 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 ALDH3B2P48448 385 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 AMTP48728 403 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 PPP1CBP62140 327 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 RPL8P62917 257 aaKnown RBP5.21□□□□□ -1.58
CLK1-212ENST00000482590 UBA52P62987 128 aaKnown RBP5.21□□□□□ -1.58
CLK1-212ENST00000482590 RPL24P83731 157 aaKnown RBP5.21□□□□□ -1.58
CLK1-212ENST00000482590 FMODQ06828 376 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 OXA1LQ15070 435 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 TAL2Q16559 108 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 HIST3H3Q16695 136 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 GCSAMLQ5JQS6 135 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 ARL9Q6T311 187 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 DRAM2Q6UX65 266 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 ZNF101Q8IZC7 436 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 ZFP82Q8N141 532 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 SPICQ8N5J4 248 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 OR4D11Q8NGI4 311 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 OR6Q1Q8NGQ2 317 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 OR6F1Q8NGZ6 308 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 OR10A6Q8NH74 314 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 PFN4Q8NHR9 129 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 GEMIN6Q8WXD5 167 aaKnown RBP5.21□□□□□ -1.58
CLK1-212ENST00000482590 POP5Q969H6 163 aaKnown RBP5.21□□□□□ -1.58
CLK1-212ENST00000482590 PTH2Q96A98 100 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 TAMM41Q96BW9 452 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 YIPF6Q96EC8 236 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 PRSS27Q9BQR3 290 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 SLC25A33Q9BSK2 321 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 OR2J1Q9GZK6 312 aa5.21□□□□□ -1.58
CLK1-212ENST00000482590 POLR2J2Q9GZM3 115 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms