RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 GDF1P27539 372 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 SRD5A2P31213 254 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 APLNRP35414 380 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 ARF1P84077 181 aaKnown RBP12.22□□□□□ -0.45
CCDC78-211ENST00000481804 CYP2G1PQ6ZSU1 146 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 TAF15Q92804 592 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC78-211ENST00000481804 ELOVL1Q9BW60 279 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 WDR61Q9GZS3 305 aaKnown RBP12.22□□□□□ -0.45
CCDC78-211ENST00000481804 WASF3Q9UPY6 502 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 RBMXL2O75526 392 aaKnown RBP12.22□□□□□ -0.45
CCDC78-211ENST00000481804 CEACAM21Q3KPI0 293 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 PCSK4Q6UW60 755 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 ZNF295-AS1Q8N0V1 137 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 NOL4LQ96MY1 436 aaPredicted RBP12.22□□□□□ -0.45
CCDC78-211ENST00000481804 DUSP23Q9BVJ7 150 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 PRDM14Q9GZV8 571 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 FSCN3Q9NQT6 498 aa12.22□□□□□ -0.45
CCDC78-211ENST00000481804 DOCK11Q5JSL3 2073 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 KBTBD11O94819 623 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 PMP22Q01453 160 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 HLA-BQ31612 363 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 RIPPLY2Q5TAB7 128 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 TMEM18Q96B42 140 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 IMMP1LQ96LU5 166 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 HIPK2Q9H2X6 1198 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 TRAPPC2LQ9UL33 140 aa12.21□□□□□ -0.45
CCDC78-211ENST00000481804 TCAPO15273 167 aa12.21□□□□□ -0.46
CCDC78-211ENST00000481804 UMODP07911 640 aa12.21□□□□□ -0.46
CCDC78-211ENST00000481804 MMP7P09237 267 aaPredicted RBP12.21□□□□□ -0.46
CCDC78-211ENST00000481804 RFPL3SP0C7P2 107 aa12.21□□□□□ -0.46
CCDC78-211ENST00000481804 RPS16P62249 146 aaKnown RBP12.21□□□□□ -0.46
CCDC78-211ENST00000481804 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.21□□□□□ -0.46
CCDC78-211ENST00000481804 DDA1Q9BW61 102 aa12.21□□□□□ -0.46
CCDC78-211ENST00000481804 PARLQ9H300 379 aa12.21□□□□□ -0.46
CCDC78-211ENST00000481804 ZNF552Q9H707 407 aaPredicted RBP12.21□□□□□ -0.46
CCDC78-211ENST00000481804 A8MWP6 167 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 RPL23P62829 140 aaKnown RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 ZNF124Q15973 351 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 SRSF7Q16629 238 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 ZNF324BQ6AW86 544 aaPredicted RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 GGNQ86UU5 652 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 HAPLN4Q86UW8 402 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 WDR54Q9H977 334 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 TMEM9BQ9NQ34 198 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 LIN7CQ9NUP9 197 aaKnown RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 ANKRD30BLA7E2S9 258 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 DEGS1O15121 323 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 SCGB1D1O95968 90 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 PFN1P07737 140 aaKnown RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 SLC25A6P12236 298 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 RPP25LQ8N5L8 163 aaKnown RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 OR51G1Q8NGK1 321 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 WFIKKN1Q96NZ8 548 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 NDUFAF3Q9BU61 184 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 FGF23Q9GZV9 251 aaPredicted RBP12.2□□□□□ -0.46
CCDC78-211ENST00000481804 HRASP01112 189 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 IGKV1-5P01602 117 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 PLA2G5P39877 138 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 SLC10A1Q14973 349 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 FAM58AQ8N1B3 248 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 ZNF709Q8N972 641 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 OR2T10Q8NGZ9 312 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 C2orf88Q9BSF0 95 aa12.2□□□□□ -0.46
CCDC78-211ENST00000481804 LOC102723996A0A087X1L8 192 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 MKRN2OSH3BPM6 223 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 NGFP01138 241 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 GZMHP20718 246 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 OTX2P32243 289 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 CHRNA7P36544 502 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 MLF1P58340 268 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 FAM3BP58499 235 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-211ENST00000481804 KRTAP27-1Q3LI81 207 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 SAXO1Q8IYX7 474 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 DNASE2BQ8WZ79 361 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 LSM10Q969L4 123 aaKnown RBP12.19□□□□□ -0.46
CCDC78-211ENST00000481804 RAB24Q969Q5 203 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 APOBEC3DQ96AK3 386 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-211ENST00000481804 ZDBF2Q9HCK1 2354 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 LRP5LA4QPB2 252 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 KIAA1324LA8MWY0 1029 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-211ENST00000481804 SIRPB1O00241 398 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 GCGP01275 180 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 B3GALT5-AS1P59052 145 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 AGBL5Q8NDL9 886 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 OR10G9Q8NGN4 311 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 OR10G7Q8NGN6 311 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 AHCTF1Q8WYP5 2266 aa12.19□□□□□ -0.46
CCDC78-211ENST00000481804 BMP5P22003 454 aa12.18□□□□□ -0.46
CCDC78-211ENST00000481804 EPHA8P29322 1005 aaPredicted RBP12.18□□□□□ -0.46
CCDC78-211ENST00000481804 FOLR3P41439 243 aa12.18□□□□□ -0.46
CCDC78-211ENST00000481804 KCNIP4Q6PIL6 250 aa12.18□□□□□ -0.46
CCDC78-211ENST00000481804 Q8NFD4 153 aa12.18□□□□□ -0.46
CCDC78-211ENST00000481804 GATAD1Q8WUU5 269 aa12.18□□□□□ -0.46
CCDC78-211ENST00000481804 PRRG4Q9BZD6 226 aa12.18□□□□□ -0.46
CCDC78-211ENST00000481804 ACTR3CQ9C0K3 210 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms