RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 YLPM1P49750 1951 aaKnown RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 A0A1W2PPK0 400 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 RNF222A6NCQ9 220 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 OOEPA6NGQ2 149 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 NKX6-3A6NJ46 265 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 COLCA2A8K830 154 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 SRRM5B3KS81 715 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 LYNX1G3V0Z9 82 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 SMLR1H3BR10 107 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 OR2F2O95006 317 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 NXPH2O95156 264 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 CDRT1O95170 752 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 FSTL3O95633 263 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 MAS1P04201 325 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 UCHL1P09936 223 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 OR4E1P0C645 316 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 TMEM225BP0DP42 221 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 LYNX1P0DP58 116 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 IGFBP3P17936 291 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 SRMP19623 302 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 USF1P22415 310 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 CPT2P23786 658 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 PPIFP30405 207 aaKnown RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF93P35789 620 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 CFHR2P36980 270 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 MDH2P40926 338 aaKnown RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 CDX1P47902 265 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 KCNJ3P48549 501 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 PITPNBP48739 271 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 FABP5Q01469 135 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 SRSF4Q08170 494 aaKnown RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 PDZK1IP1Q13113 114 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 OR2F1Q13607 317 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 IL18Q14116 193 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 KISS1Q15726 138 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 TMEM155Q4W5P6 130 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 DMRTC1Q5HYR2 192 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF57Q68EA5 555 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF660Q6AZW8 331 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 LPCAT3Q6P1A2 487 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 WDR82Q6UXN9 313 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 UNQ9370/PRO34162Q6UXP9 181 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 TMUB2Q71RG4 321 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 WDR86Q86TI4 376 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 SAXO1Q8IYX7 474 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 JAGN1Q8N5M9 183 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 POC1AQ8NBT0 407 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 BPIFCQ8NFQ6 507 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 RXFP4Q8TDU9 374 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 TNFAIP8L1Q8WVP5 186 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 AQP3Q92482 292 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 CMSS1Q9BQ75 279 aaKnown RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 THAP7Q9BT49 309 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 BPESC1Q9GZL8 116 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 METTL17Q9H7H0 456 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 METTL8Q9H825 291 aaKnown RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 ELL3Q9HB65 397 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-209ENST00000479532 MGAT4CQ9UBM8 478 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 TMED3Q9Y3Q3 217 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 WIPI2Q9Y4P8 454 aa5.16□□□□□ -1.58
SF3B1-209ENST00000479532 CELSR2Q9HCU4 2923 aa5.15□□□□□ -1.58
SF3B1-209ENST00000479532 IGHV4-30-2A0A087WSY4 118 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 TRAV1-2A0A0B4J238 106 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 IGKV1-9A0A0C4DH69 117 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 A0A1B0GV90 55 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 SEC14L6B5MCN3 397 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 LGALS8O00214 317 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 FGF16O43320 207 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 TRIAP1O43715 76 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 SSNA1O43805 119 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 CREBL2O60519 120 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-209ENST00000479532 HOXB5P09067 269 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 PGA5P0DJD9 388 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 CXCL2P19875 107 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 CXCL3P19876 107 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 MPZP25189 248 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 LMO1P25800 156 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 S100A2P29034 98 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 CD80P33681 288 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 ZP1P60852 638 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 SNRPEP62304 92 aaKnown RBP5.15□□□□□ -1.59
SF3B1-209ENST00000479532 RSU1Q15404 277 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 SPRNQ5BIV9 151 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF626Q68DY1 528 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 AWAT2Q6E213 333 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 C22orf42Q6IC83 251 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 TMEM91Q6ZNR0 172 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 DNM1P46Q6ZS02 220 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF826PQ6ZT77 177 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 SLC25A26Q70HW3 274 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 SLC36A1Q7Z2H8 476 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 CALHM1Q8IU99 346 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 TGIF2LYQ8IUE0 185 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 ARRDC1Q8N5I2 433 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 GCSAMQ8N6F7 178 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 HSD17B11Q8NBQ5 300 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 OR8B3Q8NGG8 313 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 OR52N4Q8NGI2 321 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 OR51A2Q8NGJ7 313 aa5.15□□□□□ -1.59
SF3B1-209ENST00000479532 OR5D18Q8NGL1 313 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms