RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 OOEPA6NGQ2 149 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 EIF3GO75821 320 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL20A1-206ENST00000479501 BTCP35070 178 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 BPIFB3P59826 476 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 LBHQ53QV2 105 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-206ENST00000479501 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 OR5D13Q8NGL4 314 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 PRDM14Q9GZV8 571 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 SMDT1Q9H4I9 107 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 NDUFB3O43676 98 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 HRASP01112 189 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF883P0CG24 379 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 CSN1S1P47710 185 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 RSPO4Q2I0M5 234 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-206ENST00000479501 C1QL2Q7Z5L3 287 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 FOXJ2Q9P0K8 574 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 IGFBP3P17936 291 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-206ENST00000479501 MRGPRFQ96AM1 343 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF71Q9NQZ8 489 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-206ENST00000479501 C1QL1O75973 258 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 ADH4P08319 380 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 HOXA6P31267 233 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 GNG4P50150 75 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 ANKRD55Q3KP44 614 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 MRGPRGQ86SM5 289 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 KIAA1456Q9P272 454 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 PAM16Q9Y3D7 125 aa12.37□□□□□ -0.43
COL20A1-206ENST00000479501 MPTX1A8MV57 137 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 MELTFP08582 738 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 GZMHP20718 246 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 GNG10P50151 68 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 RAB7AP51149 207 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 LRRC10Q5BKY1 277 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 MYPOPQ86VE0 399 aaPredicted RBP12.36□□□□□ -0.43
COL20A1-206ENST00000479501 ANAPC16Q96DE5 110 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 RNF122Q9H9V4 155 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 TRBV23-1A0A0A0MS06 115 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 TMEM210A6NLX4 147 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 COX7A2P2O60397 106 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 TRGC2P03986 189 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 GAPDHP04406 335 aaKnown RBP12.36□□□□□ -0.43
COL20A1-206ENST00000479501 MDKP21741 143 aaPredicted RBP12.36□□□□□ -0.43
COL20A1-206ENST00000479501 OR10J1P30954 320 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
COL20A1-206ENST00000479501 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 OR10G8Q8NGN5 311 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 POM121L2Q96KW2 1035 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF355PQ9NSJ1 428 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A10PA6NDY2 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A18PA6NE21 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A16PA6NEW6 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A20PA6NIJ5 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A8PA6NJQ4 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A7PA6NKC0 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A22PA8MWA6 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A12PA8MX19 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A5PA8MXJ8 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A23PA8MXZ1 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 SYNGR1O43759 233 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 SCTP09683 121 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A15PP0C7V4 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A13PP0C7W8 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A14PP0C7W9 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 FAM90A24PP0C7X0 464 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 COX5BP10606 129 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 UCP2P55851 309 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 KHDC3LQ587J8 217 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 THADAQ6YHU6 1953 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 CYB561D1Q8N8Q1 229 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 RCC2Q9P258 522 aaKnown RBP12.36□□□□□ -0.43
COL20A1-206ENST00000479501 IGLV3-32A0A0A0MS00 114 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 RPLP1P05386 114 aaKnown RBP12.36□□□□□ -0.43
COL20A1-206ENST00000479501 TMEM50BP56557 158 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 BTNL3Q6UXE8 466 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 C11orf42Q8N5U0 333 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 CCL17Q92583 94 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 ACY3Q96HD9 319 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 ELOVL1Q9BW60 279 aa12.36□□□□□ -0.43
COL20A1-206ENST00000479501 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 NHLH2Q02577 135 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 ATP6V1FQ16864 119 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 ATP1A1-AS1Q5TC04 95 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 DHRS7BQ6IAN0 325 aaPredicted RBP12.35□□□□□ -0.43
COL20A1-206ENST00000479501 FA2HQ7L5A8 372 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
COL20A1-206ENST00000479501 OR10C1Q96KK4 312 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 SIGLEC12Q96PQ1 595 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 GBF1Q92538 1859 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 ARL16Q0P5N6 197 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 GFI1Q99684 422 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 MYOZ1Q9NP98 299 aaPredicted RBP12.35□□□□□ -0.43
COL20A1-206ENST00000479501 CLPSP04118 112 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 AESQ08117 197 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 GABRA6Q16445 453 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 WDR73Q6P4I2 378 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 MOGAT3Q86VF5 341 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms