RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 HKR1P10072 659 aa21.6■■□□□ 1.05
CCM2-211ENST00000478582 ELK1P19419 428 aa21.6■■□□□ 1.05
CCM2-211ENST00000478582 PPP1CCP36873 323 aaKnown RBP21.6■■□□□ 1.05
CCM2-211ENST00000478582 MNDAP41218 407 aa21.6■■□□□ 1.05
CCM2-211ENST00000478582 TMEM69Q5SWH9 247 aa21.6■■□□□ 1.05
CCM2-211ENST00000478582 PIFOQ8TCI5 191 aa21.6■■□□□ 1.05
CCM2-211ENST00000478582 IGKV1-6A0A0C4DH72 117 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 BTBD17A6NE02 478 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 SLC31A2O15432 143 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 ZBTB25P24278 435 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 TAS2R20P59543 309 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 C16orf87Q6PH81 154 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 MAFIPQ8WZ33 124 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 CABLES2Q9BTV7 478 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 CHIAQ9BZP6 476 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 TOLLIPQ9H0E2 274 aa21.59■■□□□ 1.05
CCM2-211ENST00000478582 SMIM31A0A1B0GVY4 71 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 H3BUX3 64 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 ITGB1BP1O14713 200 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 GSTT2P0CG29 244 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 GSTT2BP0CG30 244 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 ZNF137PP52743 207 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 FOXL1Q12952 345 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 HERPUD1Q15011 391 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 CCDC144NLQ6NUI1 221 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 ST6GALNAC6Q969X2 333 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 ST6GALNAC5Q9BVH7 336 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 SLC23A1Q9UHI7 598 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 VPREB3Q9UKI3 123 aa21.58■■□□□ 1.05
CCM2-211ENST00000478582 ANK2Q01484 3957 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 IGKV1D-8A0A087WSZ0 117 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 IL3RAP26951 378 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 AWAT1Q58HT5 328 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 C3orf56Q8N813 242 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 DTX3Q8N9I9 347 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 RPEQ96AT9 228 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 ABHD14AQ9BUJ0 271 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 SLIRPQ9GZT3 109 aaKnown RBP21.57■■□□□ 1.04
CCM2-211ENST00000478582 ABCB10Q9NRK6 738 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 TNFRSF19Q9NS68 423 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 NDUFA13Q9P0J0 144 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 OR1A1Q9P1Q5 309 aa21.57■■□□□ 1.04
CCM2-211ENST00000478582 HLA-DQB1P01920 261 aa21.56■■□□□ 1.04
CCM2-211ENST00000478582 CEACAM6P40199 344 aa21.56■■□□□ 1.04
CCM2-211ENST00000478582 CBX5P45973 191 aa21.56■■□□□ 1.04
CCM2-211ENST00000478582 RAB7AP51149 207 aa21.56■■□□□ 1.04
CCM2-211ENST00000478582 ARHGDIBP52566 201 aa21.56■■□□□ 1.04
CCM2-211ENST00000478582 ZNF816Q0VGE8 651 aaPredicted RBP21.56■■□□□ 1.04
CCM2-211ENST00000478582 OR2AK2Q8NG84 335 aa21.56■■□□□ 1.04
CCM2-211ENST00000478582 TOMM40LQ969M1 308 aa21.56■■□□□ 1.04
CCM2-211ENST00000478582 TRBV6-7A0A0A0MS04 114 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 FAM25AB3EWG3 89 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 FAM25CB3EWG5 89 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 FAM25GB3EWG6 89 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 CTDSP2O14595 271 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 HSPA12AO43301 675 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 TPPPO94811 219 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 PTHLHP12272 177 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 RPL15P61313 204 aaKnown RBP21.55■■□□□ 1.04
CCM2-211ENST00000478582 PLA1AQ53H76 456 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 IGSF11Q5DX21 431 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 NXF2Q9GZY0 626 aaKnown RBP21.55■■□□□ 1.04
CCM2-211ENST00000478582 MIXL1Q9H2W2 232 aa21.55■■□□□ 1.04
CCM2-211ENST00000478582 GAPDHP04406 335 aaKnown RBP21.54■■□□□ 1.04
CCM2-211ENST00000478582 BRS3P32247 399 aa21.54■■□□□ 1.04
CCM2-211ENST00000478582 RAB13P51153 203 aa21.54■■□□□ 1.04
CCM2-211ENST00000478582 DIAPH2-AS1Q14236 149 aa21.54■■□□□ 1.04
CCM2-211ENST00000478582 HOGA1Q86XE5 327 aa21.54■■□□□ 1.04
CCM2-211ENST00000478582 OR8H3Q8N146 312 aa21.54■■□□□ 1.04
CCM2-211ENST00000478582 EDARADDQ8WWZ3 215 aa21.54■■□□□ 1.04
CCM2-211ENST00000478582 GHITMQ9H3K2 345 aa21.54■■□□□ 1.04
CCM2-211ENST00000478582 HSD17B6O14756 317 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 GPR137BO60478 399 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 CTXN2P0C2S0 81 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 PRSS3P35030 304 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 CNIH2Q6PI25 160 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 LIAT1Q6ZQX7 453 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 ODF3L1Q8IXM7 274 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 OR10J5Q8NHC4 309 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 DGCR14Q96DF8 476 aaKnown RBP21.53■■□□□ 1.04
CCM2-211ENST00000478582 AGMATQ9BSE5 352 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 IFI27L2Q9H2X8 130 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 ANXA10Q9UJ72 324 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 ADAM30Q9UKF2 790 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 TCF19Q9Y242 345 aa21.53■■□□□ 1.04
CCM2-211ENST00000478582 TENM1Q9UKZ4 2725 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 A0A1W2PPI3 338 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 BET1O15155 118 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 RGS5O15539 181 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 LYG1Q8N1E2 194 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 RTN4IP1Q8WWV3 396 aaPredicted RBP21.52■■□□□ 1.04
CCM2-211ENST00000478582 PARP12Q9H0J9 701 aaKnown RBP21.52■■□□□ 1.04
CCM2-211ENST00000478582 C11orf54Q9H0W9 315 aaPredicted RBP21.52■■□□□ 1.04
CCM2-211ENST00000478582 RDH8Q9NYR8 311 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 EXTL2Q9UBQ6 330 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 ANAPC10Q9UM13 185 aa21.52■■□□□ 1.04
CCM2-211ENST00000478582 MRPS7Q9Y2R9 242 aaKnown RBP21.52■■□□□ 1.04
CCM2-211ENST00000478582 DPPA5A6NC42 116 aa21.51■■□□□ 1.03
CCM2-211ENST00000478582 FAM181BA6NEQ2 426 aa21.51■■□□□ 1.03
CCM2-211ENST00000478582 FAM90A9PA6NNJ1 464 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms