RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 SIGLEC12Q96PQ1 595 aa5.22□□□□□ -1.57
SH3D19-207ENST00000478503 OR5B12Q96R08 314 aa5.22□□□□□ -1.57
SH3D19-207ENST00000478503 REG4Q9BYZ8 158 aa5.22□□□□□ -1.57
SH3D19-207ENST00000478503 CRIM1Q9NZV1 1036 aa5.22□□□□□ -1.57
SH3D19-207ENST00000478503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.21□□□□□ -1.57
SH3D19-207ENST00000478503 RAB29O14966 203 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 PAGE4O60829 102 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 ZNF84P51523 738 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 TGIF1Q15583 401 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 DCAF12Q5T6F0 453 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 CRIP3Q6Q6R5 217 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 DHRS13Q6UX07 377 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 FBXL14Q8N1E6 418 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 TMEM251Q8N6I4 163 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 FNDC9Q8TBE3 224 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 MAP1LC3CQ9BXW4 147 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 PRO3102Q9H379 93 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 FLVCR1Q9Y5Y0 555 aa5.21□□□□□ -1.57
SH3D19-207ENST00000478503 OTOGLQ3ZCN5 2332 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 A0A1B0GW55 424 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 ZNF705EA8MWA4 302 aaPredicted RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 CDRT15L2A8MXV6 281 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 PPIAL4DF5H284 164 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 MKRN2OSH3BPM6 223 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DLL1O00548 723 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DHRS3O75911 302 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4L2P0CJ85 424 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4L3P0CJ86 424 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4L4P0CJ87 422 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4L5P0CJ88 424 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4L6P0CJ89 424 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4L7P0CJ90 424 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 NPBWR2P48146 333 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 PSG4Q00888 419 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 ZNF92Q03936 586 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 SRSF1Q07955 248 aaKnown RBP eCLIP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4L9Q6RFH8 374 aaPredicted RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 ASCL4Q6XD76 172 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 WFDC8Q8IUA0 241 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 C10orf35Q96D05 121 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 HS3ST6Q96QI5 342 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 PIGMQ9H3S5 423 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 IL36RNQ9UBH0 155 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 DUX4Q9UBX2 424 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 HMSDA8MTL9 139 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 F2RL2O00254 374 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 OR7C1O76099 320 aaPredicted RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 HOXD4P09016 255 aaPredicted RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 RCC1P18754 421 aaPredicted RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 CYB561P49447 251 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 RPS27AP62979 156 aaKnown RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 GRB2P62993 217 aaKnown RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 SUPT4H1P63272 117 aaKnown RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 SRSF3P84103 164 aaKnown RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 TLE1Q04724 770 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 ZFP36L1Q07352 338 aaKnown RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 HIST3H3Q16695 136 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 OR2W3Q7Z3T1 314 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 NUFIP2Q7Z417 695 aaKnown RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 OR5M9Q8NGP3 310 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 OR1S2Q8NGQ3 325 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 PTH2Q96A98 100 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 WBP1Q96G27 269 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 TMEM56Q96MV1 263 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 SIGMAR1Q99720 223 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 SPAG8Q99932 426 aaPredicted RBP5.21□□□□□ -1.58
SH3D19-207ENST00000478503 PRRG4Q9BZD6 226 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 LIME1Q9H400 295 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 PRSS50Q9UI38 385 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 SLC45A2Q9UMX9 530 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 TMEM56-RWDD3S4R434 201 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 AKAP13Q12802 2813 aa5.21□□□□□ -1.58
SH3D19-207ENST00000478503 IGLV3-32A0A0A0MS00 114 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 TRAV39A0A0B4J263 110 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 C1QTNF9BB2RNN3 333 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 RNASEK-C17orf49H0YIS7 233 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 CDS2O95674 445 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 CD79AP11912 226 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 FCGR2BP31994 310 aaPredicted RBP5.2□□□□□ -1.58
SH3D19-207ENST00000478503 KCNJ3P48549 501 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 HOXA4Q00056 320 aaPredicted RBP5.2□□□□□ -1.58
SH3D19-207ENST00000478503 MC2RQ01718 297 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 ECH1Q13011 328 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 HOGA1Q86XE5 327 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 ZDHHC23Q8IYP9 409 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 OCC1Q8TAD7 63 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 SPTSSAQ969W0 71 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 BORCS8Q96FH0 119 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 FOXB1Q99853 325 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 SULT4A1Q9BR01 284 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 RTBDNQ9BSG5 229 aaPredicted RBP5.2□□□□□ -1.58
SH3D19-207ENST00000478503 THYN1Q9P016 225 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 TNFSF18Q9UNG2 199 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 IGKV1-12A0A0C4DH73 117 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 A0A1W2PNU3 283 aaPredicted RBP5.2□□□□□ -1.58
SH3D19-207ENST00000478503 LRRC3CA6NJW4 275 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 ETV2O00321 342 aaPredicted RBP5.2□□□□□ -1.58
SH3D19-207ENST00000478503 MFNGO00587 321 aa5.2□□□□□ -1.58
SH3D19-207ENST00000478503 NTN3O00634 580 aaPredicted RBP5.2□□□□□ -1.58
SH3D19-207ENST00000478503 IGKV1D-12P01611 117 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms