RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 RANP62826 216 aaKnown RBP8.39□□□□□ -1.07
COL13A1-207ENST00000478219 PSG4Q00888 419 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 PMP22Q01453 160 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 MSMO1Q15800 293 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 Q6ZN92 141 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 OR5AU1Q8NGC0 362 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 APH1AQ96BI3 265 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 ZNF442Q9H7R0 627 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 SLC45A2Q9UMX9 530 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 FER1L5A0AVI2 2057 aa8.39□□□□□ -1.07
COL13A1-207ENST00000478219 IGHV3-20A0A0C4DH32 117 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 HS3ST1O14792 307 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 IGLC2P0DOY2 106 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 HOXB2P14652 356 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 GRB2P62993 217 aaKnown RBP8.38□□□□□ -1.07
COL13A1-207ENST00000478219 HHEXQ03014 270 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 ATP6V1FQ16864 119 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 ZNF784Q8NCA9 323 aaPredicted RBP8.38□□□□□ -1.07
COL13A1-207ENST00000478219 OR51H1Q8NH63 302 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 PSMF1Q92530 271 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 ZNF552Q9H707 407 aaPredicted RBP8.38□□□□□ -1.07
COL13A1-207ENST00000478219 IGKV3D-11A0A0A0MRZ8 115 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 IGKV1-6A0A0C4DH72 117 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 A0A0U1RQV5 110 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 TOMM40O96008 361 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 PSG2P11465 335 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 EPHA8P29322 1005 aaPredicted RBP8.38□□□□□ -1.07
COL13A1-207ENST00000478219 GNB1P62873 340 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 SERF2P84101 59 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 ZNF468Q5VIY5 522 aaPredicted RBP8.38□□□□□ -1.07
COL13A1-207ENST00000478219 SHISA6Q6ZSJ9 500 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 ATOH7Q8N100 152 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 SLC22A18ASQ8N1D0 253 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 OSR2Q8N2R0 312 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 HS3ST6Q96QI5 342 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 ALKBH4Q9NXW9 302 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 PSENENQ9NZ42 101 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 TP73-AS1Q9UF72 201 aa8.38□□□□□ -1.07
COL13A1-207ENST00000478219 CABIN1Q9Y6J0 2220 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 TRBV20OR9-2A0A075B6H5 130 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 ZNF816-ZNF321PA0A0X1KG74 233 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 DIRC3C9JPN6 131 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 C3orf80F5H4A9 247 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 HSPB6O14558 160 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 PGLYRP1O75594 196 aaPredicted RBP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 OR7C1O76099 320 aaPredicted RBP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 IGKV1-39P01597 117 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 IGKV1D-39P04432 117 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 COL8A2P25067 703 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 THBS3P49746 956 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 CARD18P57730 90 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 RPS16P62249 146 aaKnown RBP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 PAFAH1B2P68402 229 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 RNPS1Q15287 305 aaKnown RBP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 TMEM196Q5HYL7 178 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 SPANXN5Q5MJ07 72 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 OR8G2PQ6IF36 304 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 C1orf174Q8IYL3 243 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 TMEM234Q8WY98 164 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 TAF15Q92804 592 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 OR6C1Q96RD1 312 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 TXN2Q99757 166 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 SAMD10Q9BYL1 202 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 PLA2G2FQ9BZM2 168 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 WNT10AQ9GZT5 417 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 ERRFI1Q9UJM3 462 aaPredicted RBP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 COX11Q9Y6N1 276 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 LRP4O75096 1905 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 TRAV39A0A0B4J263 110 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 TMEM150CB9EJG8 249 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 CRISP2P16562 243 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 CTSSP25774 331 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 CD38P28907 300 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 ATP5G3P48201 142 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 BLKP51451 505 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 RUNX3Q13761 415 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 CLEC2AQ6UVW9 174 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 ADPRHL1Q8NDY3 354 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 DDIT4LQ96D03 193 aa8.37□□□□□ -1.07
COL13A1-207ENST00000478219 ZNF837Q96EG3 531 aaPredicted RBP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
COL13A1-207ENST00000478219 LOC102724200A0A096LPH7 203 aaPredicted RBP8.36□□□□□ -1.07
COL13A1-207ENST00000478219 BLACEA4D250 179 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 J3KRW8 73 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 M0R135 149 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 SYNGR2O43760 224 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 GDF9O60383 454 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 PDCD6O75340 191 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 NDUFB4O95168 129 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
COL13A1-207ENST00000478219 GFERP55789 205 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 UBE2G2P60604 165 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 YPEL3P61236 119 aaPredicted RBP8.36□□□□□ -1.07
COL13A1-207ENST00000478219 NSDHLQ15738 373 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 ACSF3Q4G176 576 aaPredicted RBP8.36□□□□□ -1.07
COL13A1-207ENST00000478219 Q6ZSR6 202 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
COL13A1-207ENST00000478219 FAM122AQ96E09 287 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms