RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PANX1Q96RD7 426 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 WFDC6Q9BQY6 131 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 ERP44Q9BS26 406 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 TLNRD1Q9H1K6 362 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 IKZF5Q9H5V7 419 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 WDR55Q9H6Y2 383 aaPredicted RBP3.14□□□□□ -1.91
VPS50-214ENST00000477935 WDR76Q9H967 626 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 RETNQ9HD89 108 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 C19orf12Q9NSK7 152 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 EMCNQ9ULC0 261 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 WSB1Q9Y6I7 421 aa3.14□□□□□ -1.91
VPS50-214ENST00000477935 PRORSD1PA6NEY8 169 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 C16orf90A8MZG2 172 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 C1QCP02747 245 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 BCHEP06276 602 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 TSPAN19P0C672 248 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 P0C879 139 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 CTLA4P16410 223 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 FUT1P19526 365 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 CD24P25063 80 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 PSMB8P28062 276 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 SERPINB5P36952 375 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 RGS8P57771 180 aaPredicted RBP3.13□□□□□ -1.91
VPS50-214ENST00000477935 DSTNP60981 165 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ACTA2P62736 377 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ACTG2P63267 376 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ACTC1P68032 377 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ACTA1P68133 377 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 HIST1H3AP68431 136 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 PITPNAQ00169 270 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 BDH1Q02338 343 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 CBX3Q13185 183 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 C9orf129Q5T035 196 aaKnown RBP3.13□□□□□ -1.91
VPS50-214ENST00000477935 HIST2H3PS2Q5TEC6 136 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 DHRS4L2Q6PKH6 230 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ZYG11AQ6WRX3 759 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 HIST2H3AQ71DI3 136 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ZNF561Q8N587 486 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ZNF596Q8TC21 504 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ACMSDQ8TDX5 336 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 TWIST2Q8WVJ9 160 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 RGP1Q92546 391 aaPredicted RBP3.13□□□□□ -1.91
VPS50-214ENST00000477935 DLX4Q92988 240 aaPredicted RBP3.13□□□□□ -1.91
VPS50-214ENST00000477935 SEH1LQ96EE3 360 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 ZBTB18Q99592 522 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 C1orf50Q9BV19 199 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 C1orf21Q9H246 121 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 PLEKHA1Q9HB21 404 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 RASL12Q9NYN1 266 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 LINC00527Q9UJ94 153 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 FIS1Q9Y3D6 152 aa3.13□□□□□ -1.91
VPS50-214ENST00000477935 IGKV1D-17A0A075B6S4 117 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 IGHV2-26A0A0B4J1V2 119 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 TMEM210A6NLX4 147 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 C5orf58C9J3I9 102 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 F5H5K5 113 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 LINC01619G3V211 115 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 H0Y9J4 135 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 RER1O15258 196 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 SERPINB7O75635 380 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 ACSM4P0C7M7 580 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 PSG2P11465 335 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 CCL3L1P16619 93 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 TCP1P17987 556 aaKnown RBP3.12□□□□□ -1.91
VPS50-214ENST00000477935 VDAC1P21796 283 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 S100A3P33764 101 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 BMI1P35226 326 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 AQP2P41181 271 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 PLTPP55058 493 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 DLX6P56179 175 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 RSPO1Q2MKA7 263 aaPredicted RBP3.12□□□□□ -1.91
VPS50-214ENST00000477935 LGALS9BQ3B8N2 356 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 CCDC153Q494R4 210 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 ANKDD1AQ495B1 522 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 PAN3Q58A45 887 aaKnown RBP3.12□□□□□ -1.91
VPS50-214ENST00000477935 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 OR52W1Q6IF63 320 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 DLEU7Q6UYE1 221 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 ASRGL1Q7L266 308 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 FTMTQ8N4E7 242 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 C5orf56Q8N8D9 126 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 MYOZ3Q8TDC0 251 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 ARPC1AQ92747 370 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 FLYWCH2Q96CP2 140 aaKnown RBP3.12□□□□□ -1.91
VPS50-214ENST00000477935 MICU1Q9BPX6 476 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 NRIP2Q9BQI9 281 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 ZNF426Q9BUY5 554 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 MFFQ9GZY8 342 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 TMEM133Q9H2Q1 129 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 ABCB9Q9NP78 766 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 MRM2Q9UI43 246 aaKnown RBP3.12□□□□□ -1.91
VPS50-214ENST00000477935 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 SNX12Q9UMY4 172 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 TP53TG1Q9Y2A0 90 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 COMMD3-BMI1R4GMX3 469 aa3.12□□□□□ -1.91
VPS50-214ENST00000477935 FLG2Q5D862 2391 aaPredicted RBP3.11□□□□□ -1.91
VPS50-214ENST00000477935 FAT1Q14517 4588 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 ARRDC5A6NEK1 342 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 E9PBE3 544 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 XKRYO14609 159 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms