RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 CTXND1A0A1B0GTU2 59 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 LY86O95711 162 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 HLA-HP01893 362 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 AMBPP02760 352 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 P04436 131 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 GZMBP10144 247 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 CD99P14209 185 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 EPHA8P29322 1005 aaPredicted RBP11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 HOXA6P31267 233 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 SPCS3P61009 180 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 LCN2P80188 198 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 CLN3Q13286 438 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 SSX2Q16385 188 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 MRPL21Q7Z2W9 205 aaKnown RBP11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF573Q86YE8 665 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 CISD2Q8N5K1 135 aaKnown RBP11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 LHX4Q969G2 390 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 RHOVQ96L33 236 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 RSG1Q9BU20 258 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 TMEM9BQ9NQ34 198 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 CACNG5Q9UF02 275 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 ABCA7Q8IZY2 2146 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 ASCC3Q8N3C0 2202 aaKnown RBP11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 GGCTO75223 188 aaKnown RBP11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 PSG2P11465 335 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 MYF5P13349 255 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 PDCD1Q15116 288 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 KCNIP4Q6PIL6 250 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 MRPL52Q86TS9 123 aaKnown RBP11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 ZBTB34Q8NCN2 500 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 NAXEQ8NCW5 288 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 AGBL5Q8NDL9 886 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 TMEM18Q96B42 140 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 IMMP2LQ96T52 175 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR51I2Q9H344 312 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 CHODLQ9H9P2 273 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 MTCH1Q9NZJ7 389 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.57
HLA-DMA-208ENST00000477541 SPTBN2O15020 2390 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 A0A1B0GV90 55 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 UMODP07911 640 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 GALR1P47211 349 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 TRA2AQ13595 282 aaKnown RBP eCLIP11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 MSMO1Q15800 293 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 ADIRFQ15847 76 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 TMEM249Q2WGJ8 235 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 GUSBP11Q6P575 273 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 RBKSQ9H477 322 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
HLA-DMA-208ENST00000477541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 LY6G6EA0A0G2JKS1 128 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 CXCL13O43927 109 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 NTF4P34130 210 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 GPM6AP51674 278 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 RPL23P62829 140 aaKnown RBP11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 COL10A1Q03692 680 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 SPEM1Q8N4L4 309 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 TCTEX1D1Q8N7M0 179 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR2Y1Q8NGV0 311 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR10D3Q8NH80 312 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 FGFBP3Q8TAT2 258 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 LURAP1Q96LR2 239 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 TMEM147Q9BVK8 224 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 U3KQA8 63 aa11.5□□□□□ -0.57
HLA-DMA-208ENST00000477541 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 H3BP45 60 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 SERPINA7P05543 415 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 PATE4P0C8F1 98 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 ARR3P36575 388 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 C4orf17Q53FE4 359 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 HAPLN4Q86UW8 402 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 Q8IYB0 196 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 CPEB3Q8NE35 698 aaKnown RBP11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR4C12Q96R67 309 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 MRPL37Q9BZE1 423 aaKnown RBP11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 VSIRQ9H7M9 311 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 ERRFI1Q9UJM3 462 aaPredicted RBP11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 GAB2Q9UQC2 676 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 LAMP3Q9UQV4 416 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 RTTNQ86VV8 2226 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 TNFSF12O43508 249 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 IGKV1-39P01597 117 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 IGKV1-5P01602 117 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 IGKV1D-39P04432 117 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 CELA2AP08217 269 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 GNG3P63215 75 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 SLC10A1Q14973 349 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 FAM58AQ8N1B3 248 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR2T10Q8NGZ9 312 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR51H1Q8NH63 302 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR5P3Q8WZ94 311 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 TXNDC17Q9BRA2 123 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 FGF23Q9GZV9 251 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms