RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	B3GALT1	Q9Y5Z6	326 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	MRPS18B	Q9Y676	258 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	LY96	Q9Y6Y9	160 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520		R4GMQ9	66 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CACNA1H	O95180	2353 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TRIO	O75962	3097 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	NUP214	P35658	2090 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	KIAA1549L	Q6ZVL6	1849 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520		A0A0U1RQK1	487 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	LOC102725191	A0A1B0GVB3	256 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520		A0A1B0GWA3	101 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF320	A2RRD8	509 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	TMEM189	A5PLL7	270 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520		A6NDN8	102 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	DPRX	A6NFQ7	191 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	FRS3	O43559	492 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF207	O43670	478 aa	Known RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	LDB3	O75112	727 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	HLA-DQA2	P01906	255 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	GNB3	P16520	340 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	HIST1H1T	P22492	207 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	TUBG1	P23258	451 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	S100G	P29377	79 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	NKX2-1	P43699	371 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	LGALS7	P47929	136 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	CYB561	P49447	251 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	GPM6A	P51674	278 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF133	P52736	654 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	SNU13	P55769	128 aa	Known RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	PIGP	P57054	158 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	DCAF7	P61962	342 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	DMWD	Q09019	674 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ARFRP1	Q13795	201 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ELAVL3	Q14576	367 aa	Known RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	TMEM187	Q14656	261 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZIC1	Q15915	447 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF658B	Q4V348	819 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ABCA11P	Q4W5N1	156 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	C2orf27A	Q580R0	203 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	DCST2	Q5T1A1	773 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	C1orf140	Q5VVS0	124 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	CST9LP1	Q5W188	147 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF776	Q68DI1	518 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	STUM	Q69YW2	141 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	C22orf39	Q6P5X5	142 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	RASL11A	Q6T310	242 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	RFLNA	Q6ZTI6	216 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520		Q6ZWC4	215 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	LRRC25	Q8N386	305 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	C17orf78	Q8N4C9	275 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	RFLNB	Q8N5W9	214 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	TMEM252	Q8N6L7	170 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZIC4	Q8N9L1	334 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	FER1L6-AS1	Q8NA97	138 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZFP62	Q8NB50	900 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	SCCPDH	Q8NBX0	429 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	TSTD1	Q8NFU3	115 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR51A4	Q8NGJ6	313 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR2Y1	Q8NGV0	311 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR11L1	Q8NGX0	322 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR13G1	Q8NGZ3	307 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	SLC25A40	Q8TBP6	338 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	FAM222B	Q8WU58	562 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	HOXB13	Q92826	284 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	KLK6	Q92876	244 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	BORCS7	Q96B45	105 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF681	Q96N22	645 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	AP1S3	Q96PC3	154 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	RAB40C	Q96S21	281 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	RSG1	Q9BU20	258 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	GNB1L	Q9BYB4	327 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	PARP12	Q9H0J9	701 aa	Known RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	MS4A6A	Q9H2W1	248 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	PARL	Q9H300	379 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	C11orf1	Q9H5F2	150 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZDHHC6	Q9H6R6	413 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZDHHC11	Q9H8X9	412 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	ELOVL3	Q9HB03	270 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	PATZ1	Q9HBE1	687 aa	Known RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	MMP17	Q9ULZ9	603 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	RNF24	Q9Y225	148 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	KNL1	Q8NG31	2342 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	SDK1	Q7Z5N4	2213 aa		4.02	□□□□□ -1.77
PTCD3-212	ENST00000477520	COL4A2	P08572	1712 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	NUP210L	Q5VU65	1888 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SPAG17	Q6Q759	2223 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	TRPM6	Q9BX84	2022 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	LRP5L	A4QPB2	252 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	GAGE10	A6NGK3	116 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	C4orf47	A7E2U8	309 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CEBPZOS	A8MTT3	80 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520		K7EQS6	105 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520		M0R296	226 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SLC17A3	O00476	420 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	MLNR	O43193	412 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	TSPAN6	O43657	245 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF737	O75373	536 aa		4.01	□□□□□ -1.77

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