RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 CD3EP07766 207 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 PSG2P11465 335 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 RCC1P18754 421 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 PI3P19957 117 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 IL2RGP31785 369 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 P2RX3P56373 397 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 COL10A1Q03692 680 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 MEF2CQ06413 473 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 BSPH1Q075Z2 132 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 CATR1Q13166 79 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ATXN7L3Q14CW9 347 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 PDCD1Q15116 288 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ADIPOQQ15848 244 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 MSMPQ1L6U9 139 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 IAH1Q2TAA2 248 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 PRR30Q53SZ7 412 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 KRBOX4Q5JUW0 171 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 GGNBP1Q5YKI7 109 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 EIF5AL1Q6IS14 154 aaKnown RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 ZNF818PQ6ZRF7 136 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ZNF826PQ6ZT77 177 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 TBC1D26Q86UD7 250 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ZNF695Q8IW36 515 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 FAM219AQ8IW50 185 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ZNF645Q8N7E2 425 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ANGPTL6Q8NI99 470 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 SECTM1Q8WVN6 248 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 RBPMSQ93062 196 aaKnown RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 COQ2Q96H96 371 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 SHARPINQ9H0F6 387 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 SLC25A32Q9H2D1 315 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ZNF665Q9H7R5 613 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 PLEKHF2Q9H8W4 249 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 LINC00574Q9H8X3 128 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 GCM1Q9NP62 436 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 RDH8Q9NYR8 311 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 MBD2Q9UBB5 411 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 OR14J1Q9UGF5 321 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 NSG2Q9Y328 171 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 UBE2J1Q9Y385 318 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 CADP27708 2225 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ABCA12Q86UK0 2595 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 TANC2Q9HCD6 1990 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 IGKV1D-17A0A075B6S4 117 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 TRAV38-1A0A0B4J264 116 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 ODAMA1E959 279 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 NKX6-3A6NJ46 265 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 C12orf77C9JDV5 145 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 FAM90A26D6RGX4 464 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 LGALS8O00214 317 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 F2RL2O00254 374 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 CCL21O00585 134 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 HSPB6O14558 160 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 SPRY3O43610 288 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 YPEL1O60688 119 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 TSC22D2O75157 780 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 PGLYRP1O75594 196 aaPredicted RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 DEDDO75618 318 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 ADAP1O75689 374 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 SCAF4O95104 1147 aaKnown RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 GAPDHP04406 335 aaKnown RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 HOXB5P09067 269 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 OR4A8P0C604 315 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 PVALBP20472 110 aaPredicted RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 HTR2BP41595 481 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 GABRA2P47869 451 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 P2RY1P47900 373 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 RAB7AP51149 207 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 EXOSC2Q13868 293 aaKnown RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 GNMTQ14749 295 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 PHLDA2Q53GA4 152 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 STUMQ69YW2 141 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 THOC7Q6I9Y2 204 aaKnown RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 ADAM5Q6NVV9 412 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 ZNF66Q6ZN08 573 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 MOGAT3Q86VF5 341 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 LRP11Q86VZ4 500 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 BATF2Q8N1L9 274 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 CD177Q8N6Q3 437 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 OR52M1Q8NGK5 317 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 CD300LFQ8TDQ1 290 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 ITLN1Q8WWA0 313 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 DCUN1D4Q92564 292 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 CORO2AQ92828 525 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 C14orf79Q96F83 325 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 SEC22AQ96IW7 307 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 OR10C1Q96KK4 312 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 WFIKKN1Q96NZ8 548 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 YPEL2Q96QA6 119 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 HSD17B10Q99714 261 aaKnown RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 RNF126Q9BV68 326 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 UFSP2Q9NUQ7 469 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 COA4Q9NYJ1 87 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 ERRFI1Q9UJM3 462 aaPredicted RBP5.57□□□□□ -1.52
LDB3-206ENST00000477489 FZR1Q9UM11 496 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 PPP1R3CQ9UQK1 317 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 RNF115Q9Y4L5 304 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms