RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 RNF114Q9Y508 228 aa9.94□□□□□ -0.82
CLCNKA-205ENST00000477360 HAX1O00165 279 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 MFNGO00587 321 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 OR2F2O95006 317 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 GAPDHP04406 335 aaKnown RBP9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 EBI3Q14213 229 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 PLAC9Q5JTB6 97 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 FAM71F2Q6NXP2 309 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 BAIAP2L2Q6UXY1 529 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 ZNF439Q8NDP4 499 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 OR4K15Q8NH41 348 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 OR2T6Q8NHC8 308 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 TOMM40LQ969M1 308 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 RAB3CQ96E17 227 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 S100A16Q96FQ6 103 aaKnown RBP9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 PECRQ9BY49 303 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 ATG5Q9H1Y0 275 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 DIABLOQ9NR28 239 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 GNG12Q9UBI6 72 aa9.93□□□□□ -0.82
CLCNKA-205ENST00000477360 FBN3Q75N90 2809 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 XRCC3O43542 346 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 CHST1O43916 411 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 GSTP1P09211 210 aaKnown RBP9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 HIST1H1DP16402 221 aaKnown RBP9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 MOGAT2Q3SYC2 334 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 ZNF260Q3ZCT1 412 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 MORN2Q502X0 79 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 Q6ZS49 121 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 LINC00299Q6ZSB3 139 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 IZUMO1Q8IYV9 350 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 OR8H1Q8NGG4 311 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 PHF21AQ96BD5 680 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 ARHGAP5-AS1Q96IT6 56 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 RBM14Q96PK6 669 aaKnown RBP9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 CITED1Q99966 193 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 PRSS22Q9GZN4 317 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 MIXL1Q9H2W2 232 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 OR2S2Q9NQN1 319 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 RABL2AQ9UBK7 228 aaPredicted RBP9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 ADAM30Q9UKF2 790 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 RABL2BQ9UNT1 228 aa9.92□□□□□ -0.82
CLCNKA-205ENST00000477360 TRAV39A0A0B4J263 110 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 CTDSP2O14595 271 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 HSD17B6O14756 317 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 LANCL1O43813 399 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 HPGDSO60760 199 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 EIF4EP06730 217 aaKnown RBP9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 ELK1P19419 428 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 PITPNAQ00169 270 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 KIR2DS1Q14954 304 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 LY6EQ16553 131 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 PNLIPRP3Q17RR3 467 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 CCBE1Q6UXH8 406 aaPredicted RBP9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 CAPSLQ8WWF8 208 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 EDARADDQ8WWZ3 215 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 CFHR4Q92496 578 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 TOLLIPQ9H0E2 274 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 CHMP1AQ9HD42 196 aaPredicted RBP9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 Q9N2K0 584 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 AK3Q9UIJ7 227 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 KCNK7Q9Y2U2 307 aa9.91□□□□□ -0.82
CLCNKA-205ENST00000477360 FAM172BPA6NC97 362 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 FGF16O43320 207 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 ZBTB25P24278 435 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 CD1BP29016 333 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 RAB13P51153 203 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 HLA-DRB3P79483 266 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 MRPS15P82914 257 aaKnown RBP9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 CNPY1Q3B7I2 92 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 CDNFQ49AH0 187 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 CT45A1Q5HYN5 189 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 PRR31Q5SQ13 230 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 UTF1Q5T230 341 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 OR2AK2Q8NG84 335 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 OR4A4PQ8NGN8 299 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 OR1L1Q8NH94 360 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 CT45A3Q8NHU0 189 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 C15orf40Q8WUR7 153 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 RTN4IP1Q8WWV3 396 aaPredicted RBP9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 CMSS1Q9BQ75 279 aaKnown RBP9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 ABHD14AQ9BUJ0 271 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 C6orf62Q9GZU0 229 aaPredicted RBP9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 AUNIPQ9H7T9 357 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 PTTG2Q9NZH5 202 aa9.9□□□□□ -0.82
CLCNKA-205ENST00000477360 IGHV1-3A0A0C4DH29 117 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 TRDCB7Z8K6 153 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 TIMM23O14925 209 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 RGS5O15539 181 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 CD3GP09693 182 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 DTYMKP23919 212 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 PAX6P26367 422 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 GNG10P50151 68 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 TAS2R20P59543 309 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 LTC4SQ16873 150 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 HACD4Q5VWC8 232 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 TGIF2LXQ8IUE1 241 aa9.89□□□□□ -0.83
CLCNKA-205ENST00000477360 LAX1Q8IWV1 398 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms