RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 POM121CA8CG34 1229 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 J3QRK9 145 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 OR3A3P47888 321 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 REG1BP48304 166 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 DGCR2P98153 550 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 BAMBIQ13145 260 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 SRSF7Q16629 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
COPS3-207ENST00000477299 LYSMD2Q8IV50 215 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 PIFOQ8TCI5 191 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 ABHD14BQ96IU4 210 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 CABLES2Q9BTV7 478 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 MEGF9Q9H1U4 602 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 DPM3Q9P2X0 92 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 ANXA10Q9UJ72 324 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 MGAT4AQ9UM21 535 aa12.81□□□□□ -0.36
COPS3-207ENST00000477299 DNAJC9-AS1A6NH13 148 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 HSPA12AO43301 675 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 FBP1P09467 338 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 KIR2DS4P43632 304 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 IER3P46695 156 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 KIR2DS1Q14954 304 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 SLC9A3R2Q15599 337 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 TPTE2P1Q5T6R2 138 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 MINOS1Q5TGZ0 78 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 OR6Q1Q8NGQ2 317 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 ZNF418Q8TF45 676 aaPredicted RBP12.8□□□□□ -0.36
COPS3-207ENST00000477299 ST6GALNAC6Q969X2 333 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 MALSU1Q96EH3 234 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 SSX3Q99909 188 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 AGMATQ9BSE5 352 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 RAB9BQ9NP90 201 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 KLK11Q9UBX7 282 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 ANAPC10Q9UM13 185 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 MINOS1-NBL1R4GNA1 71 aa12.8□□□□□ -0.36
COPS3-207ENST00000477299 LEUTXA8MZ59 168 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 PROP1O75360 226 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 NFYAP23511 347 aaPredicted RBP12.79□□□□□ -0.36
COPS3-207ENST00000477299 ZBTB25P24278 435 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 LINC00205P59089 165 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 HILS1P60008 231 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 IL18Q14116 193 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 LY6EQ16553 131 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 CCDC190Q86UF4 302 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 H1FOOQ8IZA3 346 aaPredicted RBP12.79□□□□□ -0.36
COPS3-207ENST00000477299 LYG1Q8N1E2 194 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 C8orf31Q8N9H6 132 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 OR10X1Q8NGY0 326 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 ABHD14AQ9BUJ0 271 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 IFI27L2Q9H2X8 130 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 ADAM30Q9UKF2 790 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 V9GYH0 126 aa12.79□□□□□ -0.36
COPS3-207ENST00000477299 ZNF736B4DX44 427 aaPredicted RBP12.78□□□□□ -0.36
COPS3-207ENST00000477299 H3BUX3 64 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 TCF21O43680 179 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 LANCL1O43813 399 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 PMP2P02689 132 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 LPLP06858 475 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 NAT1P18440 290 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 HLA-DMAP28067 261 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 RFX2P48378 723 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 TMEM30BQ3MIR4 351 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 RPL39P5Q59GN2 51 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 STEAP3Q658P3 488 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 CCBE1Q6UXH8 406 aaPredicted RBP12.78□□□□□ -0.36
COPS3-207ENST00000477299 OR2AK2Q8NG84 335 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 OR10J5Q8NHC4 309 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 ZNF251Q9BRH9 671 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 TOLLIPQ9H0E2 274 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 A3GALT2U3KPV4 340 aa12.78□□□□□ -0.36
COPS3-207ENST00000477299 IGHV3-72A0A0B4J1Y9 119 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 IGKV1D-13A0A0B4J2D9 117 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 A0A1W2PPI3 338 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 FABP12A6NFH5 140 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 RGS11O94810 467 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 OR8U9P0C7N5 309 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 IGKV1-13P0DP09 117 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 CBX5P45973 191 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 UBA52P62987 128 aaKnown RBP12.77□□□□□ -0.37
COPS3-207ENST00000477299 Q3ZCU0 254 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 LY6G6FQ5SQ64 297 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 FAM131AQ6UXB0 335 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
COPS3-207ENST00000477299 OR8U1Q8NH10 309 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 TOMM40LQ969M1 308 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.37
COPS3-207ENST00000477299 SAA2-SAA4A0A096LPE2 208 aa12.76□□□□□ -0.37
COPS3-207ENST00000477299 HSD17B6O14756 317 aa12.76□□□□□ -0.37
COPS3-207ENST00000477299 SAA2P0DJI9 122 aaPredicted RBP12.76□□□□□ -0.37
COPS3-207ENST00000477299 S100A5P33763 92 aa12.76□□□□□ -0.37
COPS3-207ENST00000477299 ARPC4P59998 168 aa12.76□□□□□ -0.37
COPS3-207ENST00000477299 SCGB2A2Q13296 93 aa12.76□□□□□ -0.37
COPS3-207ENST00000477299 ZNF79Q15937 498 aa12.76□□□□□ -0.37
COPS3-207ENST00000477299 LRRC75BQ2VPJ9 315 aa12.76□□□□□ -0.37
COPS3-207ENST00000477299 PYHIN1Q6K0P9 492 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms