RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 WDR13Q9H1Z4 485 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 DPAGT1Q9H3H5 408 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 ZNF286AQ9HBT8 521 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 CHMP1AQ9HD42 196 aaPredicted RBP5.23□□□□□ -1.57
CLDN4-205ENST00000476494 HRASLSQ9HDD0 168 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 RAB9BQ9NP90 201 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 SLC2A8Q9NY64 477 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 ETAA1Q9NY74 926 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 SCP2D1Q9UJQ7 156 aa5.23□□□□□ -1.57
CLDN4-205ENST00000476494 IGHV3-64DA0A0J9YX35 117 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 LINC00854A0A1B0GVQ3 168 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 TMEM30CPA0ZSE6 113 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 UBE2QL1A1L167 161 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 NKX6-3A6NJ46 265 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 TRDCB7Z8K6 153 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 K7N7A8 449 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 SIRPB1O00241 398 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 MGST3O14880 152 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 MT-ND4P03905 459 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 CD3DP04234 171 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 FCER2P06734 321 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 FCGR3AP08637 254 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 PTHLHP12272 177 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 MMP9P14780 707 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 AMY2BP19961 511 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 GZMHP20718 246 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 DUSP1P28562 367 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ERP29P30040 261 aaKnown RBP5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ECI1P42126 302 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 RFX2P48378 723 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 SNU13P55769 128 aaKnown RBP5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ARPC4P59998 168 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 C11orf91Q3C1V1 193 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 TMEM155Q4W5P6 130 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 RNASE12Q5GAN4 147 aaKnown RBP5.22□□□□□ -1.57
CLDN4-205ENST00000476494 STUMQ69YW2 141 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ZNF880Q6PDB4 577 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 C11orf88Q6PI97 169 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ZNF782Q6ZMW2 699 aaPredicted RBP5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ZNF497Q6ZNH5 498 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 Q6ZNX1 250 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 SLC36A1Q7Z2H8 476 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 NRARPQ7Z6K4 114 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 BOLLQ8N9W6 283 aaKnown RBP5.22□□□□□ -1.57
CLDN4-205ENST00000476494 OR5H2Q8NGV7 314 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 CREB3L1Q96BA8 519 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 CITED2Q99967 270 aaPredicted RBP5.22□□□□□ -1.57
CLDN4-205ENST00000476494 EDA2RQ9HAV5 297 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 Q9N2K0 584 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 MCUBQ9NWR8 336 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 KCNIP1Q9NZI2 227 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 IL36RNQ9UBH0 155 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 KAAG1Q9UBP8 84 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 OR14J1Q9UGF5 321 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 SLC23A1Q9UHI7 598 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ANXA10Q9UJ72 324 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 ZNF222Q9UK12 451 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 NUBP2Q9Y5Y2 271 aa5.22□□□□□ -1.57
CLDN4-205ENST00000476494 IGKV1D-17A0A075B6S4 117 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 A0A0U1RQK1 487 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 MEIS3P1A6NDR6 274 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 SIGLEC5O15389 551 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 ZNF737O75373 536 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 DUS4LO95620 317 aaKnown RBP5.21□□□□□ -1.58
CLDN4-205ENST00000476494 DHFRP00374 187 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 CYB5R3P00387 301 aaPredicted RBP5.21□□□□□ -1.58
CLDN4-205ENST00000476494 TK1P04183 234 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 AMY2AP04746 511 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 HLA-DMAP28067 261 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 GABRA2P47869 451 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 GMFBP60983 142 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 TSPAN5P62079 268 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 BTG1P62324 171 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 CDK10Q15131 360 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 RBMS2Q15434 407 aaKnown RBP5.21□□□□□ -1.58
CLDN4-205ENST00000476494 SURF2Q15527 256 aaPredicted RBP5.21□□□□□ -1.58
CLDN4-205ENST00000476494 PLA1AQ53H76 456 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 C6orf183Q5T699 404 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 GPR157Q5UAW9 335 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 DHRS11Q6UWP2 260 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 ZNF788Q6ZQV5 615 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 BTN2A1Q7KYR7 527 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 OVCH2Q7RTZ1 564 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 BATF2Q8N1L9 274 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 CD177Q8N6Q3 437 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 GVQW1Q8N7I0 195 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 ZNF565Q8N9K5 539 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 ASCC1Q8N9N2 400 aaKnown RBP5.21□□□□□ -1.58
CLDN4-205ENST00000476494 OR4C16Q8NGL9 310 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 OR4A4PQ8NGN8 299 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 OR6F1Q8NGZ6 308 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 OR56B4Q8NH76 319 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 MRPL30Q8TCC3 161 aaKnown RBP5.21□□□□□ -1.58
CLDN4-205ENST00000476494 SNAPC3Q92966 411 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 MARVELD1Q9BSK0 173 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 PPA2Q9H2U2 334 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 MBNL3Q9NUK0 354 aaKnown RBP5.21□□□□□ -1.58
CLDN4-205ENST00000476494 OR6C3Q9NZP0 311 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 VPREB3Q9UKI3 123 aa5.21□□□□□ -1.58
CLDN4-205ENST00000476494 ELF5Q9UKW6 265 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms