RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 PATE1Q8WXA2 126 aa9.04□□□□□ -0.96
ABCF1-205ENST00000475993 STARD4Q96DR4 205 aa9.04□□□□□ -0.96
ABCF1-205ENST00000475993 RNF186Q9NXI6 227 aa9.04□□□□□ -0.96
ABCF1-205ENST00000475993 GTF3C1Q12789 2109 aa9.04□□□□□ -0.96
ABCF1-205ENST00000475993 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 A0A0U1RQK1 487 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 OR6C6A6NF89 314 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 IGKV3-11P04433 115 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 TSPOP30536 169 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 KRTDAPP60985 99 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 GRB2P62993 217 aaKnown RBP9.03□□□□□ -0.96
ABCF1-205ENST00000475993 SMAGPQ0VAQ4 97 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 TMEM267Q0VDI3 215 aaPredicted RBP9.03□□□□□ -0.96
ABCF1-205ENST00000475993 MFAP5Q13361 173 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 KIAA0895LQ68EN5 471 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 Q6ZSR3 168 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 ZNF525Q8N782 197 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 NAT6Q93015 286 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 LHX4Q969G2 390 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 UBE2ZQ9H832 354 aaPredicted RBP9.03□□□□□ -0.96
ABCF1-205ENST00000475993 PLA2G3Q9NZ20 509 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 GRIFINA4D1Z8 144 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 OR2T8A6NH00 312 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 H3BP45 60 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 TNFRSF10CO14798 259 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 MLNRO43193 412 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 RBFOX2O43251 390 aaKnown RBP eCLIP9.03□□□□□ -0.962e-8■■■□□ 16.6
ABCF1-205ENST00000475993 ADMP35318 185 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 GABRA2P47869 451 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 PSMB3P49720 205 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 DEFB103AP81534 67 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 NSDHLQ15738 373 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 LRRC75BQ2VPJ9 315 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 C20orf196Q8IYI0 205 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 VWCEQ96DN2 955 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 SPACA9Q96E40 222 aaPredicted RBP9.03□□□□□ -0.96
ABCF1-205ENST00000475993 ZNF479Q96JC4 524 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 PILRBQ9UKJ0 227 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 SELENOKQ9Y6D0 94 aa9.03□□□□□ -0.96
ABCF1-205ENST00000475993 G3V4G9 280 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 J3KRW8 73 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 HS3ST1O14792 307 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 TOX4O94842 621 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 MT-CO2P00403 227 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 CD99P14209 185 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 YPEL3P61236 119 aaPredicted RBP9.02□□□□□ -0.96
ABCF1-205ENST00000475993 PPP1CBP62140 327 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 FOXL1Q12952 345 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 SHBQ15464 509 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 PRAMEF5Q5TYX0 476 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 PRAMEF6Q5VXH4 476 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 OOSP2Q86WS3 158 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 BMFQ96LC9 184 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 SLC39A9Q9NUM3 307 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 ABI3Q9P2A4 366 aa9.02□□□□□ -0.96
ABCF1-205ENST00000475993 MKI67P46013 3256 aaKnown RBP9.02□□□□□ -0.96
ABCF1-205ENST00000475993 KIAA1324LA8MWY0 1029 aaPredicted RBP9.02□□□□□ -0.97
ABCF1-205ENST00000475993 DIRC3C9JPN6 131 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 ANGPTL7O43827 346 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 WNT2P09544 360 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 MLF1P58340 268 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 OR8B8Q15620 311 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 BHLHA15Q7RTS1 189 aaPredicted RBP9.02□□□□□ -0.97
ABCF1-205ENST00000475993 RPP25LQ8N5L8 163 aaKnown RBP9.02□□□□□ -0.97
ABCF1-205ENST00000475993 ZNF721Q8TF20 911 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 RAB40CQ96S21 281 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 NUDT22Q9BRQ3 303 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 GTSF1LQ9H1H1 148 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 PIGLQ9Y2B2 252 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 ATG2BQ96BY7 2078 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 H0Y8X5 98 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 AZU1P20160 251 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 CLDN17P56750 224 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 CLRN1P58418 232 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 ARL16Q0P5N6 197 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 PLCXD2Q0VAA5 305 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 SLC25A47Q6Q0C1 308 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 Q8N976 141 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 OR5AU1Q8NGC0 362 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 C10orf35Q96D05 121 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 MMABQ96EY8 250 aaPredicted RBP9.02□□□□□ -0.97
ABCF1-205ENST00000475993 SFRP2Q96HF1 295 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 FAM103A1Q9BTL3 118 aaKnown RBP9.02□□□□□ -0.97
ABCF1-205ENST00000475993 SLC7A10Q9NS82 523 aa9.02□□□□□ -0.97
ABCF1-205ENST00000475993 PPIAL4EA0A075B759 164 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 PPIAL4CA0A0B4J2A2 164 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 PPIAL4DF5H284 164 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 IGKV1D-33P01593 117 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 IGKV1-33P01594 117 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 PPIAL4FP0DN26 164 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 LHX2P50458 406 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 FOXL2P58012 376 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 TLE1Q04724 770 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 ZNF818PQ6ZRF7 136 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 WDR5BQ86VZ2 330 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 FER1L6-AS1Q8NA97 138 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 OR4F5Q8NH21 305 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 PSMF1Q92530 271 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms