RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	POLE4	Q9NR33	117 aa		3.12	□□□□□ -1.91
PRKD3-208	ENST00000475912	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	3.12	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF221	Q9UK13	617 aa		3.12	□□□□□ -1.91
PRKD3-208	ENST00000475912	PITPNC1	Q9UKF7	332 aa		3.12	□□□□□ -1.91
PRKD3-208	ENST00000475912	NDUFAF1	Q9Y375	327 aa		3.12	□□□□□ -1.91
PRKD3-208	ENST00000475912	APOB	P04114	4563 aa	Known RBP	3.12	□□□□□ -1.91
PRKD3-208	ENST00000475912	IGLV1-36	A0A0B4J1U3	117 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912		A0A1W2PRG6	482 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	ODF3B	A8MYP8	253 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	CENPBD1	B2RD01	187 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	SGCE	O43556	437 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	PLIN3	O60664	434 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	GPX5	O75715	221 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	FGF4	P08620	206 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	H2BFM	P0C1H6	154 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	MUC1	P15941	1255 aa	Predicted RBP	3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	MSR1	P21757	451 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	COX7A1	P24310	79 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	AQP2	P41181	271 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	RPL32	P62910	135 aa	Known RBP	3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	IL24	Q13007	206 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	ECH1	Q13011	328 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR1Q1	Q15612	314 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR8G1	Q15617	311 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	SSX2	Q16385	188 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	DGUOK	Q16854	277 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	MICB	Q29980	383 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	ABCA11P	Q4W5N1	156 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	LRRC10	Q5BKY1	277 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	ANXA8L1	Q5VT79	327 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	STUM	Q69YW2	141 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	KCNIP4	Q6PIL6	250 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	WDR86	Q86TI4	376 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	C10orf107	Q8IVU9	208 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLC38A6	Q8IZM9	456 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLC26A10	Q8NG04	563 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR5D13	Q8NGL4	314 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	MAL2	Q969L2	176 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	TESC	Q96BS2	214 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	PELI1	Q96FA3	418 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	VSIG2	Q96IQ7	327 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	GAFA1	Q96PS6	74 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	PANX1	Q96RD7	426 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	ADAT1	Q9BUB4	502 aa	Known RBP	3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	RETN	Q9HD89	108 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	C19orf12	Q9NSK7	152 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	CALML5	Q9NZT1	146 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	PIPOX	Q9P0Z9	390 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	BTNL2	Q9UIR0	455 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	RIMS3	Q9UJD0	308 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF229	Q9UJW7	825 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	ANGPT4	Q9Y264	503 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	IFT52	Q9Y366	437 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	DNAH6	Q9C0G6	4158 aa		3.11	□□□□□ -1.91
PRKD3-208	ENST00000475912	LOC100131303	A0A0U1RQF7	123 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	PSMB11	A5LHX3	300 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	METTL21EP	A6NDL7	271 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	C12orf71	A8MTZ7	269 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912		E9PBE3	544 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	RER1	O15258	196 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF254	O75437	659 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	SPN	P16150	400 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	SERPINA2	P20848	420 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	CD24	P25063	80 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	CNTFR	P26992	372 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	IL12A	P29459	219 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLC6A1	P30531	599 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR3A4P	P47883	348 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	DAP3	P51398	398 aa	Known RBP	3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	DYNLT3	P51808	116 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	DSTN	P60981	165 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	EMX2	Q04743	252 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	SCRN3	Q0VDG4	424 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	DHRS4L2	Q6PKH6	230 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	WDR82	Q6UXN9	313 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF621	Q6ZSS3	439 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLC36A1	Q7Z2H8	476 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	NANOGNB	Q7Z5D8	188 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	NAA40	Q86UY6	237 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF695	Q8IW36	515 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	TRIML2	Q8N7C3	387 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR10A7	Q8NGE5	316 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR5L1	Q8NGL2	311 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR1F12	Q8NHA8	337 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	LRRC29	Q8WV35	223 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	EMG1	Q92979	244 aa	Known RBP	3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	APOBEC3D	Q96AK3	386 aa	Predicted RBP	3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	C7orf34	Q96L11	122 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	NOL4L	Q96MY1	436 aa	Predicted RBP	3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	NABP2	Q9BQ15	211 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF426	Q9BUY5	554 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	TMEM27	Q9HBJ8	222 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	BCL2L10	Q9HD36	194 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	INIP	Q9NRY2	104 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	SIGLEC8	Q9NYZ4	499 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	EXTL2	Q9UBQ6	330 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF391	Q9UJN7	358 aa		3.1	□□□□□ -1.91
PRKD3-208	ENST00000475912	UTP11	Q9Y3A2	253 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms