RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 TMEM38BQ9NVV0 291 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 IFNL4K9M1U5 179 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 TP53I11O14683 189 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 IGKV1-39P01597 117 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 IGKV1D-39P04432 117 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 IL3RAP26951 378 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 CXCL12P48061 93 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 PRAMEF20Q5VT98 475 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 ZNF324BQ6AW86 544 aaPredicted RBP15.09■□□□□ 0.01
CCM2-207ENST00000475551 ZNF705AQ6ZN79 300 aaPredicted RBP15.09■□□□□ 0.01
CCM2-207ENST00000475551 OR10J5Q8NHC4 309 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 WFIKKN1Q96NZ8 548 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 CHCHD2Q9Y6H1 151 aaPredicted RBP15.09■□□□□ 0.01
CCM2-207ENST00000475551 PXMP4Q9Y6I8 212 aa15.09■□□□□ 0.01
CCM2-207ENST00000475551 CHD3Q12873 2000 aaKnown RBP15.09■□□□□ 0.01
CCM2-207ENST00000475551 PSG4Q00888 419 aa15.08■□□□□ 0.01
CCM2-207ENST00000475551 ZCCHC14Q8WYQ9 949 aaKnown RBP15.08■□□□□ 0.01
CCM2-207ENST00000475551 TBX15Q96SF7 602 aa15.08■□□□□ 0.01
CCM2-207ENST00000475551 C20orf144Q9BQM9 153 aa15.08■□□□□ 0.01
CCM2-207ENST00000475551 MRPS18CQ9Y3D5 142 aaKnown RBP15.08■□□□□ 0.01
CCM2-207ENST00000475551 TRAPPC1Q9Y5R8 145 aa15.08■□□□□ 0.01
CCM2-207ENST00000475551 UBE2L5PA0A1B0GUS4 154 aa15.08■□□□□ 0
CCM2-207ENST00000475551 LRP5LA4QPB2 252 aa15.08■□□□□ 0
CCM2-207ENST00000475551 LILRA1O75019 489 aa15.08■□□□□ 0
CCM2-207ENST00000475551 NPSP0C0P6 89 aa15.08■□□□□ 0
CCM2-207ENST00000475551 CD99P14209 185 aa15.08■□□□□ 0
CCM2-207ENST00000475551 HNRNPKP61978 463 aaKnown RBP eCLIP15.08■□□□□ 0
CCM2-207ENST00000475551 SLC38A11Q08AI6 406 aa15.08■□□□□ 0
CCM2-207ENST00000475551 TMEM144Q7Z5S9 345 aa15.08■□□□□ 0
CCM2-207ENST00000475551 SAXO1Q8IYX7 474 aa15.08■□□□□ 0
CCM2-207ENST00000475551 WDYHV1Q96HA8 205 aa15.08■□□□□ 0
CCM2-207ENST00000475551 RIMS4Q9H426 269 aaPredicted RBP15.08■□□□□ 0
CCM2-207ENST00000475551 ZNF705FA8MVS1 300 aaPredicted RBP15.07■□□□□ 0
CCM2-207ENST00000475551 K7ESF4 209 aa15.07■□□□□ 0
CCM2-207ENST00000475551 TNFSF11O14788 317 aa15.07■□□□□ 0
CCM2-207ENST00000475551 MLNRO43193 412 aa15.07■□□□□ 0
CCM2-207ENST00000475551 ZNF705DP0CH99 300 aaPredicted RBP15.07■□□□□ 0
CCM2-207ENST00000475551 ZNF705BP0CI00 300 aaPredicted RBP15.07■□□□□ 0
CCM2-207ENST00000475551 UBE2NP61088 152 aaKnown RBP15.07■□□□□ 0
CCM2-207ENST00000475551 ACSM6Q6P461 480 aa15.07■□□□□ 0
CCM2-207ENST00000475551 TMEM256Q8N2U0 113 aa15.07■□□□□ 0
CCM2-207ENST00000475551 SPSB4Q96A44 273 aa15.07■□□□□ 0
CCM2-207ENST00000475551 NEIL1Q96FI4 390 aaPredicted RBP15.07■□□□□ 0
CCM2-207ENST00000475551 KIAA2026Q5HYC2 2103 aa15.07■□□□□ 0
CCM2-207ENST00000475551 MED12Q93074 2177 aa15.07■□□□□ 0
CCM2-207ENST00000475551 PATE4P0C8F1 98 aa15.07■□□□□ 0
CCM2-207ENST00000475551 SPANXN5Q5MJ07 72 aa15.07■□□□□ 0
CCM2-207ENST00000475551 CPT1CQ8TCG5 803 aa15.07■□□□□ 0
CCM2-207ENST00000475551 MIEN1Q9BRT3 115 aa15.07■□□□□ 0
CCM2-207ENST00000475551 WNT5BQ9H1J7 359 aa15.07■□□□□ 0
CCM2-207ENST00000475551 SLC25A22Q9H936 323 aa15.07■□□□□ 0
CCM2-207ENST00000475551 SPAG17Q6Q759 2223 aa15.07■□□□□ 0
CCM2-207ENST00000475551 TNFSF13O75888 250 aa15.06■□□□□ 0
CCM2-207ENST00000475551 IGKV1-5P01602 117 aa15.06■□□□□ 0
CCM2-207ENST00000475551 FAM78BQ5VT40 261 aa15.06■□□□□ 0
CCM2-207ENST00000475551 TMEM105Q8N8V8 129 aa15.06■□□□□ 0
CCM2-207ENST00000475551 NEK7Q8TDX7 302 aa15.06■□□□□ 0
CCM2-207ENST00000475551 SF3B5Q9BWJ5 86 aaKnown RBP15.06■□□□□ 0
CCM2-207ENST00000475551 OR2H1Q9GZK4 316 aa15.06■□□□□ 0
CCM2-207ENST00000475551 TRBV6-6A0A0A6YYG2 114 aa15.06■□□□□ 0
CCM2-207ENST00000475551 YPEL1O60688 119 aa15.06■□□□□ 0
CCM2-207ENST00000475551 EDN3P14138 238 aa15.06■□□□□ 0
CCM2-207ENST00000475551 IRF2P14316 349 aa15.06■□□□□ 0
CCM2-207ENST00000475551 CD27P26842 260 aa15.06■□□□□ 0
CCM2-207ENST00000475551 WNT5AP41221 380 aa15.06■□□□□ 0
CCM2-207ENST00000475551 PPP1CBP62140 327 aa15.06■□□□□ 0
CCM2-207ENST00000475551 TLE1Q04724 770 aa15.06■□□□□ 0
CCM2-207ENST00000475551 TMEM14EPQ6UXP3 125 aa15.06■□□□□ 0
CCM2-207ENST00000475551 GATAD1Q8WUU5 269 aa15.06■□□□□ 0
CCM2-207ENST00000475551 YPEL2Q96QA6 119 aa15.06■□□□□ 0
CCM2-207ENST00000475551 HS3ST6Q96QI5 342 aa15.06■□□□□ 0
CCM2-207ENST00000475551 DEFB126Q9BYW3 111 aa15.06■□□□□ 0
CCM2-207ENST00000475551 NCOR1O75376 2440 aa15.06■□□□□ 0
CCM2-207ENST00000475551 A0A0U1RQK1 487 aa15.05■□□□□ 0
CCM2-207ENST00000475551 ZNF320A2RRD8 509 aa15.05■□□□□ 0
CCM2-207ENST00000475551 A6NNC1 897 aa15.05■□□□□ 0
CCM2-207ENST00000475551 HMGB3O15347 200 aaKnown RBP15.05■□□□□ 0
CCM2-207ENST00000475551 TOX3O15405 576 aaPredicted RBP15.05■□□□□ 0
CCM2-207ENST00000475551 NUPR1O60356 82 aa15.05■□□□□ 0
CCM2-207ENST00000475551 MRPS11P82912 194 aaKnown RBP15.05■□□□□ 0
CCM2-207ENST00000475551 FOXL1Q12952 345 aa15.05■□□□□ 0
CCM2-207ENST00000475551 RAET1LQ5VY80 246 aa15.05■□□□□ 0
CCM2-207ENST00000475551 DEFB119Q8N690 84 aa15.05■□□□□ 0
CCM2-207ENST00000475551 TMEM106BQ9NUM4 274 aa15.05■□□□□ 0
CCM2-207ENST00000475551 ERRFI1Q9UJM3 462 aaPredicted RBP15.05■□□□□ 0
CCM2-207ENST00000475551 FAM90A26D6RGX4 464 aa15.05■□□□□ -0
CCM2-207ENST00000475551 HSPB6O14558 160 aa15.05■□□□□ -0
CCM2-207ENST00000475551 B4GALT1P15291 398 aa15.05■□□□□ -0
CCM2-207ENST00000475551 GCH1P30793 250 aa15.05■□□□□ -0
CCM2-207ENST00000475551 BRS3P32247 399 aa15.05■□□□□ -0
CCM2-207ENST00000475551 CHRNA7P36544 502 aa15.05■□□□□ -0
CCM2-207ENST00000475551 TEX43Q6ZNM6 134 aa15.05■□□□□ -0
CCM2-207ENST00000475551 OR10V1Q8NGI7 309 aa15.05■□□□□ -0
CCM2-207ENST00000475551 OR10G9Q8NGN4 311 aa15.05■□□□□ -0
CCM2-207ENST00000475551 OR10G7Q8NGN6 311 aa15.05■□□□□ -0
CCM2-207ENST00000475551 GPR35Q9HC97 309 aa15.05■□□□□ -0
CCM2-207ENST00000475551 GON4LQ3T8J9 2241 aa15.05■□□□□ -0
CCM2-207ENST00000475551 DSCR4P56555 118 aaPredicted RBP15.04■□□□□ -0
CCM2-207ENST00000475551 SDSLQ96GA7 329 aa15.04■□□□□ -0
CCM2-207ENST00000475551 LPAR2Q9HBW0 351 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms