RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 UPK1BO75841 260 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 SLC22A5O76082 557 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 LY6G6DO95868 133 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 AVPP01185 164 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 IGHV1-69P01742 117 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 IFNA6P05013 189 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
MCF2L-224ENST00000475524 CEACAM6P40199 344 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 ZNF137PP52743 207 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 GNMTQ14749 295 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 MSMO1Q15800 293 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 HLA-DRB5Q30154 266 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 FAM71F2Q6NXP2 309 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 C1orf229Q6ZS94 237 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-224ENST00000475524 PNKDQ8N490 385 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 OR6F1Q8NGZ6 308 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 LHX4Q969G2 390 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 MMP28Q9H239 520 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 YAE1D1Q9NRH1 226 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 GAB2Q9UQC2 676 aa12.35□□□□□ -0.43
MCF2L-224ENST00000475524 IGHV3-43A0A0B4J1X8 118 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 TRAV40A0A0B4J280 105 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 OOSP1A8MZH6 123 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 DISC1C4P0D8 188 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 PMP2P02689 132 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 IGHV3-43DP0DP04 118 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 IL3RAP26951 378 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 FCGR2CP31995 323 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 ECI1P42126 302 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 RFX2P48378 723 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 TSPAN5P62079 268 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 LTC4SQ16873 150 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 ZNF57Q68EA5 555 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-224ENST00000475524 CLEC9AQ6UXN8 241 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 C9orf139Q6ZV77 190 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-224ENST00000475524 OR10V1Q8NGI7 309 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 PRRT1Q99946 306 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 AGMATQ9BSE5 352 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 PIPOXQ9P0Z9 390 aa12.34□□□□□ -0.43
MCF2L-224ENST00000475524 ZANQ9Y493 2812 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 CENPXA8MT69 81 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 J3QRK9 145 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 PPYP01298 95 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 FCER2P06734 321 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 COX7A1P24310 79 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 CEACAM3P40198 252 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 LUMP51884 338 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-224ENST00000475524 UCP3P55916 312 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 KLRD1Q13241 179 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 SCGB2A2Q13296 93 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 PLA1AQ53H76 456 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 CT45A1Q5HYN5 189 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 KLF17Q5JT82 389 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-224ENST00000475524 LHFPL1Q86WI0 220 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 OR4P4Q8NGL7 312 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 CT45A3Q8NHU0 189 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 MOB3AQ96BX8 217 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 TINAGL1Q9GZM7 467 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-224ENST00000475524 C11orf54Q9H0W9 315 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-224ENST00000475524 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 NUP50Q9UKX7 468 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 AKAP9Q99996 3911 aa12.33□□□□□ -0.44
MCF2L-224ENST00000475524 M0QYG6 137 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 NPFFO15130 113 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 TXNL1O43396 289 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 AMY2AP04746 511 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 ARG1P05089 322 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 ZNF735P0CB33 412 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 NFYAP23511 347 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-224ENST00000475524 HTR1DP28221 377 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 GNG10P50151 68 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 ZNF134P52741 427 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 LGALS4P56470 323 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 HERV-K104P61576 105 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 SURF2Q15527 256 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-224ENST00000475524 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 TERB2Q8NHR7 220 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-224ENST00000475524 IFI27L2Q9H2X8 130 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 HRASLSQ9HDD0 168 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
MCF2L-224ENST00000475524 FAM172BPA6NC97 362 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 LEUTXA8MZ59 168 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 LY6LH3BQJ8 138 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 BUB1B-PAK6H3BSN5 160 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 RAB29O14966 203 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 IGHV4-38-2P0DP08 117 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 AADACP22760 399 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 ASAH1Q13510 395 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 ZBTB34Q8NCN2 500 aa12.31□□□□□ -0.44
MCF2L-224ENST00000475524 OR4D10Q8NGI6 311 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms