RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 OR2T35Q8NGX2 323 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 OR8U1Q8NH10 309 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 EDARADDQ8WWZ3 215 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 IDI2-AS1Q9NZ38 188 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 PIPOXQ9P0Z9 390 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 TRBV23-1A0A0A0MS06 115 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 OVOL3O00110 214 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 PHF1O43189 567 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-210ENST00000475329 YPEL1O60688 119 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 PGLYRP1O75594 196 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-210ENST00000475329 NKX2-5P52952 324 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-210ENST00000475329 TMEM33P57088 247 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 LOXL3P58215 753 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 DRAM1Q8N682 238 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 ZNF645Q8N7E2 425 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 ZBTB34Q8NCN2 500 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 OR8B3Q8NGG8 313 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 ZNF714Q96N38 554 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 YPEL2Q96QA6 119 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 OR8B2Q96RD0 313 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 OR2D2Q9H210 308 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 RANBP3Q9H6Z4 567 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-210ENST00000475329 PLEKHF2Q9H8W4 249 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 GFOD1Q9NXC2 390 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 MIOXQ9UGB7 285 aa11.35□□□□□ -0.59
TRAF4-210ENST00000475329 UBR5O95071 2799 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-210ENST00000475329 USP9XQ93008 2570 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-210ENST00000475329 CLEC18AA5D8T8 446 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 C5orf51A6NDU8 294 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 RNF212BA8MTL3 300 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 FAM25EA8MYX2 175 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 H0Y980 276 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 B3GALNT1O75752 331 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 CLDN1O95832 211 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 WNT2P09544 360 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 OMGP23515 440 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 DNASE1P24855 282 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 GZMKP49863 264 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 SRSF4Q08170 494 aaKnown RBP11.34□□□□□ -0.59
TRAF4-210ENST00000475329 ZNF273Q14593 569 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 SP6Q3SY56 376 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 MORN2Q502X0 79 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 FAM53AQ6NSI3 398 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-210ENST00000475329 LGI3Q8N145 548 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 LRTM2Q8N967 370 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 CLEC18CQ8NCF0 446 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 OR10A7Q8NGE5 316 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 OR52M1Q8NGK5 317 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 NEIL1Q96FI4 390 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-210ENST00000475329 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 TP53RKQ96S44 253 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 CCL19Q99731 98 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 METTL8Q9H825 291 aaKnown RBP11.34□□□□□ -0.59
TRAF4-210ENST00000475329 PSG11Q9UQ72 335 aa11.34□□□□□ -0.59
TRAF4-210ENST00000475329 A1L4Q6 167 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 ITGB1BP1O14713 200 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 GPR37O15354 613 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 TNFSF12O43508 249 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 NDUFS7O75251 213 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 ADAP1O75689 374 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 IFNA21P01568 189 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 IGLV2-14P01704 120 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 F2RP25116 425 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 GPR6P46095 362 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-210ENST00000475329 PRAMEF5Q5TYX0 476 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 TMEM200BQ69YZ2 307 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 GLYATL2Q8WU03 294 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 IGFBPL1Q8WX77 278 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 MSI2Q96DH6 328 aaKnown RBP11.33□□□□□ -0.6
TRAF4-210ENST00000475329 LIN7CQ9NUP9 197 aaKnown RBP11.33□□□□□ -0.6
TRAF4-210ENST00000475329 RNF150Q9ULK6 438 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 MYO18BQ8IUG5 2567 aa11.33□□□□□ -0.6
TRAF4-210ENST00000475329 FLNCQ14315 2725 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 PIGBOS1A0A0B4J2F0 54 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 C13orf42A0A1B0GVH6 325 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 G3V3Q6 166 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 ST8SIA5O15466 376 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 HOXB5P09067 269 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 NFYBP25208 207 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 UCP1P25874 307 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 GPR12P47775 334 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 RAB7AP51149 207 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 SP5Q6BEB4 398 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF841Q6ZN19 808 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 OR51H1Q8NH63 302 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 RAB39BQ96DA2 213 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 WDR89Q96FK6 387 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-210ENST00000475329 C18orf12Q96KH6 178 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 GPHA2Q96T91 129 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 COMMD9Q9P000 198 aa11.32□□□□□ -0.6
TRAF4-210ENST00000475329 RPUSD1Q9UJJ7 312 aaKnown RBP11.32□□□□□ -0.6
TRAF4-210ENST00000475329 LRBAP50851 2863 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 DUXBA0A1W2PPF3 345 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 A0A1W2PPH5 198 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms