RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PAGE4O60829 102 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 ZNF253O75346 499 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 WISP3O95389 354 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 SOX14O95416 240 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 HRASP01112 189 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 TACSTD2P09758 323 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 ALOX5APP20292 161 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 EVI2AP22794 236 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 CDKN1AP38936 164 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 TSFMP43897 325 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 XCR1P46094 333 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 RGRP47804 291 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 EFNA5P52803 228 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 SLURP1P55000 103 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 GNB2P62879 340 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 KIR2DS5Q14953 304 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 ITPRIPL2Q3MIP1 535 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 GLIPR1L1Q6UWM5 242 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 CEACAM19Q7Z692 300 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 SLC25A42Q86VD7 318 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 LRP11Q86VZ4 500 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 CDC20BQ86Y33 519 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 OR4N5Q8IXE1 308 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 ZNF595Q8IYB9 648 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 OR2K2Q8NGT1 345 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 OR4C3Q8NH37 302 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 KIR2DL5BQ8NHK3 375 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 TMEM37Q8WXS4 190 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 EMG1Q92979 244 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 DYNLL2Q96FJ2 89 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 SEC22AQ96IW7 307 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 LINC00615Q96LM1 132 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 TIMP4Q99727 224 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 SAMD10Q9BYL1 202 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 C20orf141Q9NUB4 165 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 SERTAD4Q9NUC0 356 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 OR1A1Q9P1Q5 309 aa5.09□□□□□ -1.59
ECHDC1-215ENST00000475319 TRAV9-2A0A087WT02 112 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 TEX48A0A1B0GUV7 120 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 PRSS37A4D1T9 235 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM212A6NML5 194 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 CD300LBA8K4G0 201 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 H3BMH7 237 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 IFNL4K9M1U5 179 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 MPZL1O95297 269 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 CXCL10P02778 98 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 PRH1P02810 166 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 SPINK8P0C7L1 97 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 LINC00869P0C866 280 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 C8orf88P0DMB2 117 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 CT45A10P0DMU9 189 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 HIST1H1DP16402 221 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 FBLP22087 321 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 PSMB4P28070 264 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 S100A3P33764 101 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 CDKN2AP42771 156 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 SUMO2P61956 95 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 NTHL1P78549 312 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 LY6DQ14210 128 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 ZIC1Q15915 447 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 LRRC75BQ2VPJ9 315 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 SPANXN4Q5MJ08 99 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 UTF1Q5T230 341 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 Q6ZSR9 355 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 RPS27LQ71UM5 84 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 MRGPREQ86SM8 312 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF547Q8IVP9 402 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 TDHQ8IZJ6 230 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 SIGLECL1Q8N7X8 197 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM229BQ8NBD8 167 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 CLEC1AQ8NC01 280 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 OR51G1Q8NGK1 321 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 OR10Q1Q8NGQ4 319 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 OR8S1Q8NH09 359 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 FGF11Q92914 225 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 NAT6Q93015 286 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 NEIL2Q969S2 332 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 ADTRPQ96IZ2 230 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 PECRQ9BY49 303 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 ATG10Q9H0Y0 220 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 FNDC4Q9H6D8 234 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 WDR76Q9H967 626 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 ACER3Q9NUN7 267 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 TVP23BQ9NYZ1 205 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 IL36GQ9NZH8 169 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF581Q9P0T4 197 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF443Q9Y2A4 671 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 FOCADQ5VW36 1801 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 MICAL3Q7RTP6 2002 aa5.08□□□□□ -1.6
ECHDC1-215ENST00000475319 FEZF1A0PJY2 475 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM8BA6NDV4 472 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OR51F1A6NGY5 319 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 F5H5K5 113 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ST8SIA3O43173 380 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PHF1O43189 567 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 NGFRP08138 427 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF728P0DKX0 622 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 HTR1DP28221 377 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 CTGFP29279 349 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms