RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SF3B6Q9Y3B4 125 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ANAPC1Q9H1A4 1944 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 A0A1B0GTI1 187 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 A0A1B0GX51 115 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 NKX2-2O95096 273 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 CLDN1O95832 211 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 TYMSP04818 313 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 SNRPBP14678 240 aaKnown RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 MALP21145 153 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 IMPA1P29218 277 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 TSPOP30536 169 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 NKX2-1P43699 371 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 SPINT3P49223 89 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 KLF9Q13886 244 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 FAM174BQ3ZCQ3 159 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 TMEM97Q5BJF2 176 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 APRG1Q8IVJ8 170 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 SPNS2Q8IVW8 549 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 GRAMD2BQ96HH9 432 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 MICU1Q9BPX6 476 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 KCNIP1Q9NZI2 227 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 A0A0A6YYD5 115 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 H0YL77 283 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 SAP18O00422 153 aaKnown RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 NKX2-8O15522 239 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 BCL2L11O43521 198 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 CD8AP01732 235 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 VSIG10L2P0DP72 767 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 PIGPP57054 158 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 DEFB134Q4QY38 66 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF648Q5T619 568 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 C12orf54Q6X4T0 127 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 ADAMTSL5Q6ZMM2 481 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 Q6ZSR9 355 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 RNF175Q8N4F7 328 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 OR5AU1Q8NGC0 362 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 OR10V1Q8NGI7 309 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 TSACCQ96A04 125 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 C18orf15Q96N68 181 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 CTDSP1Q9GZU7 261 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 OR52D1Q9H346 318 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 SPANXB1Q9NS25 103 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 DCAF13Q9NV06 445 aaKnown RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 ANKRD36A6QL64 1941 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 ARID1BQ8NFD5 2236 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 MKI67P46013 3256 aaKnown RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 LRP5LA4QPB2 252 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 PITX3O75364 302 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 MOSP00540 346 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 APOHP02749 345 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 SRD5A1P18405 259 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 HRH1P35367 487 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 DCTP40126 519 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 PCBD1P61457 104 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 HERV-K104P61576 105 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 KLRB1Q12918 225 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 VWA2Q5GFL6 755 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 GLDNQ6ZMI3 551 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 CXorf67Q86X51 503 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 LILRA3Q8N6C8 439 aaPredicted RBP4.12□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF675Q8TD23 568 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 VKORC1Q9BQB6 163 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 DERL1Q9BUN8 251 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 ASIC5Q9NY37 505 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 FKBP11Q9NYL4 201 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 KLHDC2Q9Y2U9 406 aa4.12□□□□□ -1.75
NPHP3-206ENST00000474871 LOC102725191A0A1B0GVB3 256 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 ISG15P05161 165 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 NME2P22392 152 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 PCBP3P57721 371 aaKnown RBP4.11□□□□□ -1.75
NPHP3-206ENST00000474871 RPS25P62851 125 aaKnown RBP4.11□□□□□ -1.75
NPHP3-206ENST00000474871 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
NPHP3-206ENST00000474871 DEFB133Q30KQ1 61 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 STHQ8IWL8 128 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF101Q8IZC7 436 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 KIR3DL3Q8N743 410 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 OR5A2Q8NGI9 324 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 OR5D16Q8NGK9 328 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 OR8S1Q8NH09 359 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 SCAMP4Q969E2 229 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 TIMD4Q96H15 378 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 KCTD7Q96MP8 289 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 ULBP3Q9BZM4 244 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 KCNS2Q9ULS6 477 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 LOC100509620A0A075B734 347 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 SH2D1BO14796 132 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 ARPC2O15144 300 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 RPL35AP18077 110 aaKnown RBP4.11□□□□□ -1.75
NPHP3-206ENST00000474871 CR2P20023 1033 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 NPY1RP25929 384 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 LHX2P50458 406 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 GZMMP51124 257 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 LGALS4P56470 323 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 TLE3Q04726 772 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF141Q15928 474 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 GGTA1PQ4G0N0 100 aa4.11□□□□□ -1.75
NPHP3-206ENST00000474871 EIF5AL1Q6IS14 154 aaKnown RBP4.11□□□□□ -1.75
NPHP3-206ENST00000474871 APOOLQ6UXV4 268 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms