RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SOX6P35712 828 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 GNG10P50151 68 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 GNG2P59768 71 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 ARL6IP1Q15041 203 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 CNPY1Q3B7I2 92 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 LY6G6FQ5SQ64 297 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 OR52W1Q6IF63 320 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 TRAT1Q6PIZ9 186 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 Q6YL49 198 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 SLC25A48Q6ZT89 311 aaKnown RBP5.63□□□□□ -1.51
LIMD1-204ENST00000474665 HOGA1Q86XE5 327 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 SNX29P2Q8IUI4 249 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 TEX29Q8N6K0 151 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 C8orf31Q8N9H6 132 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 OR6Q1Q8NGQ2 317 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 OR9G1Q8NH87 305 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 IL1F10Q8WWZ1 152 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 GALMQ96C23 342 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 C5orf30Q96GV9 206 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 YPEL2Q96QA6 119 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF251Q9BRH9 671 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 ST6GALNAC5Q9BVH7 336 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 C6orf62Q9GZU0 229 aaPredicted RBP5.63□□□□□ -1.51
LIMD1-204ENST00000474665 MS4A7Q9GZW8 240 aaPredicted RBP5.63□□□□□ -1.51
LIMD1-204ENST00000474665 TOLLIPQ9H0E2 274 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 MEGF9Q9H1U4 602 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 MMP28Q9H239 520 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 IFI27L2Q9H2X8 130 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 MMP27Q9H306 513 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 OCEL1Q9H607 264 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 KCNIP1Q9NZI2 227 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 GNG12Q9UBI6 72 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 ADAM30Q9UKF2 790 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 MRPS7Q9Y2R9 242 aaKnown RBP5.63□□□□□ -1.51
LIMD1-204ENST00000474665 V9GYH0 126 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 A0A1W2PPI3 338 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 VGLL3A8MV65 326 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 FAM25AB3EWG3 89 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 FAM25CB3EWG5 89 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 FAM25GB3EWG6 89 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 RGS5O15539 181 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 LANCL1O43813 399 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 TUSC2O75896 110 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 TPPPO94811 219 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 PRSS3P35030 304 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 TALDO1P37837 337 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 CEACAM6P40199 344 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 IER3P46695 156 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 OR3A3P47888 321 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 RAB13P51153 203 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF137PP52743 207 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 HILS1P60008 231 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 DGCR2P98153 550 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 PITPNAQ00169 270 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 SLC9A3R2Q15599 337 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF79Q15937 498 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 SSX2Q16385 188 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 Q3ZCU0 254 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 AWAT1Q58HT5 328 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 MINOS1Q5TGZ0 78 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 STEAP3Q658P3 488 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 SHISA2Q6UWI4 295 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 CCDC190Q86UF4 302 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 H1FOOQ8IZA3 346 aaPredicted RBP5.62□□□□□ -1.51
LIMD1-204ENST00000474665 BEST4Q8NFU0 473 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 OR4A4PQ8NGN8 299 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 OR52I2Q8NH67 350 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 ZFAND2BQ8WV99 257 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 TAF15Q92804 592 aaKnown RBP eCLIP5.62□□□□□ -1.51
LIMD1-204ENST00000474665 PHF21AQ96BD5 680 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 DIRAS2Q96HU8 199 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 DUX5Q96PT3 197 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF747Q9BV97 191 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 C11orf54Q9H0W9 315 aaPredicted RBP5.62□□□□□ -1.51
LIMD1-204ENST00000474665 DPM3Q9P2X0 92 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 KLK11Q9UBX7 282 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 SLC23A1Q9UHI7 598 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 ANXA10Q9UJ72 324 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 JPT1Q9UK76 154 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 MGAT4AQ9UM21 535 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 TBL2Q9Y4P3 447 aaKnown RBP5.62□□□□□ -1.51
LIMD1-204ENST00000474665 HILPDAQ9Y5L2 63 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 MINOS1-NBL1R4GNA1 71 aa5.62□□□□□ -1.51
LIMD1-204ENST00000474665 IGKV1D-13A0A0B4J2D9 117 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 DNAJC9-AS1A6NH13 148 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF736B4DX44 427 aaPredicted RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 ITGB1BP1O14713 200 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 BET1O15155 118 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 ST8SIA5O15466 376 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 HOXA3O43365 443 aaPredicted RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 DIRAS3O95661 229 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 IGLV2-14P01704 120 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 LPLP06858 475 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 IGKV1-13P0DP09 117 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 CD24P25063 80 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 HTR1DP28221 377 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 ETV6P41212 452 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 KIR2DS4P43632 304 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 RFX2P48378 723 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 PRRX1P54821 245 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms