RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 CLDN34H7C241 214 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 RGS11O94810 467 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 ZBTB25P24278 435 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 CEACAM3P40198 252 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 UBA52P62987 128 aaKnown RBP12.72□□□□□ -0.37
COL1A1-204ENST00000474644 LRRC75BQ2VPJ9 315 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 IGSF11Q5DX21 431 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 CT45A1Q5HYN5 189 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 LY6G6FQ5SQ64 297 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 TMEM86BQ8N661 226 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 CT45A3Q8NHU0 189 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 DGCR14Q96DF8 476 aaKnown RBP12.72□□□□□ -0.37
COL1A1-204ENST00000474644 ABHD14AQ9BUJ0 271 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 PARP12Q9H0J9 701 aaKnown RBP12.72□□□□□ -0.37
COL1A1-204ENST00000474644 ADAM30Q9UKF2 790 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 MRPS7Q9Y2R9 242 aaKnown RBP12.72□□□□□ -0.37
COL1A1-204ENST00000474644 POMT1Q9Y6A1 747 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 FBN3Q75N90 2809 aa12.72□□□□□ -0.37
COL1A1-204ENST00000474644 FBN1P35555 2871 aaKnown RBP12.71□□□□□ -0.37
COL1A1-204ENST00000474644 MEIS3P1A6NDR6 274 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 VGLL3A8MV65 326 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 BET1O15155 118 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 HSPA12AO43301 675 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 DIRAS3O95661 229 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 DIAPH2-AS1Q14236 149 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 AANATQ16613 207 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 CNIH2Q6PI25 160 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 HOGA1Q86XE5 327 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 SNX29P2Q8IUI4 249 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 GVQW1Q8N7I0 195 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 TOMM40LQ969M1 308 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 TNFRSF19Q9NS68 423 aa12.71□□□□□ -0.37
COL1A1-204ENST00000474644 TRBV6-7A0A0A0MS04 114 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 OOSP1A8MZH6 123 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 H3BUX3 64 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 HSD17B6O14756 317 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 RNASE1P07998 156 aaKnown RBP12.7□□□□□ -0.38
COL1A1-204ENST00000474644 IL3RAP26951 378 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 PRSS3P35030 304 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 CEACAM6P40199 344 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 CBX5P45973 191 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 BEST4Q8NFU0 473 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 RPEQ96AT9 228 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 SSX3Q99909 188 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 CHIAQ9BZP6 476 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 DPAGT1Q9H3H5 408 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 ANXA10Q9UJ72 324 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 ANAPC10Q9UM13 185 aa12.7□□□□□ -0.38
COL1A1-204ENST00000474644 BTBD17A6NE02 478 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 TRIM77I1YAP6 450 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 FCER2P06734 321 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 LPLP06858 475 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 DYNLT3P51808 116 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 ZNF137PP52743 207 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 LYG1Q8N1E2 194 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 OR10J5Q8NHC4 309 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 PIFOQ8TCI5 191 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 GPX8Q8TED1 209 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 SNAPC3Q92966 411 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 ST6GALNAC6Q969X2 333 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 MDFIQ99750 246 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 TOLLIPQ9H0E2 274 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 IFT46Q9NQC8 304 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 RDH8Q9NYR8 311 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 A3GALT2U3KPV4 340 aa12.69□□□□□ -0.38
COL1A1-204ENST00000474644 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ITGB1BP1O14713 200 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 TPPPO94811 219 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 REG1BP48304 166 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 RAB7AP51149 207 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 RAB13P51153 203 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ARHGDIBP52566 201 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ARPC4P59998 168 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ZNF816Q0VGE8 651 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-204ENST00000474644 CCDC144NLQ6NUI1 221 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ODF3L1Q8IXM7 274 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ZFAND2BQ8WV99 257 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 EDARADDQ8WWZ3 215 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 DIRAS2Q96HU8 199 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ABHD1Q96SE0 405 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 GINS4Q9BRT9 223 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 AGMATQ9BSE5 352 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 C11orf54Q9H0W9 315 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-204ENST00000474644 MMP27Q9H306 513 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 ABCB10Q9NRK6 738 aa12.68□□□□□ -0.38
COL1A1-204ENST00000474644 SAA2-SAA4A0A096LPE2 208 aa12.67□□□□□ -0.38
COL1A1-204ENST00000474644 A6NHS1 94 aa12.67□□□□□ -0.38
COL1A1-204ENST00000474644 CTXN2P0C2S0 81 aa12.67□□□□□ -0.38
COL1A1-204ENST00000474644 SAA2P0DJI9 122 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-204ENST00000474644 LY6EQ16553 131 aa12.67□□□□□ -0.38
COL1A1-204ENST00000474644 KRTAP24-1Q3LI83 254 aa12.67□□□□□ -0.38
COL1A1-204ENST00000474644 RNASE12Q5GAN4 147 aaKnown RBP12.67□□□□□ -0.38
COL1A1-204ENST00000474644 H1FOOQ8IZA3 346 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms