RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SUCNR1Q9BXA5 334 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 SLC5A7Q9GZV3 580 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 TMEM133Q9H2Q1 129 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 LPAR2Q9HBW0 351 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 GFOD1Q9NXC2 390 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 PIPOXQ9P0Z9 390 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 KCNS2Q9ULS6 477 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 FLNCQ14315 2725 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 LRRK2Q5S007 2527 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 SMG1Q96Q15 3661 aaKnown RBP8.51□□□□□ -1.05
COL12A1-206ENST00000474564 A0A0A6YYJ9 748 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 IGHV3-43A0A0B4J1X8 118 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 C22orf46C9J442 243 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 OR8U9P0C7N5 309 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 TRAPPC2P0DI81 140 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 TRAPPC2BP0DI82 140 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 IGHV3-43DP0DP04 118 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 AADACP22760 399 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 ZFP36P26651 326 aaKnown RBP8.51□□□□□ -1.05
COL12A1-206ENST00000474564 GPR12P47775 334 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 ARHGDIBP52566 201 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 FAHD2BQ6P2I3 314 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-206ENST00000474564 ABHD12Q8N2K0 398 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 C8orf31Q8N9H6 132 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 OR8U1Q8NH10 309 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 UBALD1Q8TB05 177 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 SECTM1Q8WVN6 248 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 MOB3AQ96BX8 217 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 FAHD2AQ96GK7 314 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 SEC22CQ9BRL7 303 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 PCGF1Q9BSM1 259 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 CLEC7AQ9BXN2 247 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 KCNIP3Q9Y2W7 256 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 INSIG2Q9Y5U4 225 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 AUP1Q9Y679 476 aa8.51□□□□□ -1.05
COL12A1-206ENST00000474564 USF3Q68DE3 2245 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 TEX13DA0A0J9YY54 714 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-206ENST00000474564 KIAA1324LA8MWY0 1029 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-206ENST00000474564 FAM157AC9JC47 383 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 RAB29O14966 203 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 HLA-AP01891 365 aaKnown RBP8.5□□□□□ -1.05
COL12A1-206ENST00000474564 IL5P05113 134 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF735P0CB33 412 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 ANXA3P12429 323 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 EPHA1P21709 976 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 CD34P28906 385 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 PPP1CCP36873 323 aaKnown RBP8.5□□□□□ -1.05
COL12A1-206ENST00000474564 CD83Q01151 205 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 MSMO1Q15800 293 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 TMEM249Q2WGJ8 235 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 GLDNQ6ZMI3 551 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-206ENST00000474564 CASTOR1Q8WTX7 329 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 C1orf159Q96HA4 380 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 TMPRSS13Q9BYE2 586 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 TOLLIPQ9H0E2 274 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 HIF1ANQ9NWT6 349 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 OR1A1Q9P1Q5 309 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 MGAT4CQ9UBM8 478 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 PSG11Q9UQ72 335 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 KIAA2026Q5HYC2 2103 aa8.5□□□□□ -1.05
COL12A1-206ENST00000474564 USP9YO00507 2555 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-206ENST00000474564 A0A087X0M5 115 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 IGKV1-6A0A0C4DH72 117 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 A0A1B0GX30 115 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 A8MV72 311 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-206ENST00000474564 SNRPGP15A8MWD9 76 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 GPR31O00270 319 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 B3GALNT1O75752 331 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 TUSC2O75896 110 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 CTSDP07339 412 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-206ENST00000474564 OR4E1P0C645 316 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 EIF2B2P49770 351 aaKnown RBP8.49□□□□□ -1.05
COL12A1-206ENST00000474564 GNG10P50151 68 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 DLX6P56179 175 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 LOXL3P58215 753 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 UBE2MP61081 183 aaKnown RBP8.49□□□□□ -1.05
COL12A1-206ENST00000474564 PAX8Q06710 450 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 BAMBIQ13145 260 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 CATR1Q13166 79 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 HERPUD1Q15011 391 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 GPR157Q5UAW9 335 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 VMO1Q7Z5L0 202 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 SGPP2Q8IWX5 399 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 LYG1Q8N1E2 194 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF645Q8N7E2 425 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 WFDC11Q8NEX6 87 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 OR13C8Q8NGS7 320 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 ADTRPQ96IZ2 230 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 CYYR1Q96J86 154 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 UNKLQ9H9P5 680 aaKnown RBP8.49□□□□□ -1.05
COL12A1-206ENST00000474564 VSIG4Q9Y279 399 aa8.49□□□□□ -1.05
COL12A1-206ENST00000474564 YLPM1P49750 1951 aaKnown RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 IGHV2-26A0A0B4J1V2 119 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 A0A0B4J293 547 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 C7orf66A4D0T2 115 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 OR5H14A6NHG9 310 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms