RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 C17orf58Q2M2W7 97 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 HLA-DRB5Q30154 266 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 ZNF554Q86TJ5 538 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 PRR18Q8N4B5 295 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 KLHDC1Q8N7A1 406 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 RFESDQ8TAC1 157 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 ZNF286AQ9HBT8 521 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 KCNK7Q9Y2U2 307 aa14.98□□□□□ -0.01
CCDC171-206ENST00000474193 TRBV6-6A0A0A6YYG2 114 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 TMEM235A6NFC5 223 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 RCC1P18754 421 aaPredicted RBP14.97□□□□□ -0.01
CCDC171-206ENST00000474193 SSTR5P35346 364 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 ZNF260Q3ZCT1 412 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 LDLRAD2Q5SZI1 272 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 CCBE1Q6UXH8 406 aaPredicted RBP14.97□□□□□ -0.01
CCDC171-206ENST00000474193 IZUMO1Q8IYV9 350 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 RPEQ96AT9 228 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 KIRREL1Q96J84 757 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 HDHD3Q9BSH5 251 aaPredicted RBP14.97□□□□□ -0.01
CCDC171-206ENST00000474193 SLIRPQ9GZT3 109 aaKnown RBP14.97□□□□□ -0.01
CCDC171-206ENST00000474193 MMP28Q9H239 520 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 TAF9BQ9HBM6 251 aa14.97□□□□□ -0.01
CCDC171-206ENST00000474193 MBNL3Q9NUK0 354 aaKnown RBP14.97□□□□□ -0.01
CCDC171-206ENST00000474193 MRPS7Q9Y2R9 242 aaKnown RBP14.97□□□□□ -0.01
CCDC171-206ENST00000474193 CTDSP2O14595 271 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 CGB3P0DN86 165 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 CGB7P0DN87 165 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 S100A5P33763 92 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 TAS2R20P59543 309 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 LTC4SQ16873 150 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 TMEM30BQ3MIR4 351 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 TPTE2P1Q5T6R2 138 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 BAIAP2L2Q6UXY1 529 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 C15orf40Q8WUR7 153 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 GALMQ96C23 342 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 AUNIPQ9H7T9 357 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 EXTL2Q9UBQ6 330 aa14.96□□□□□ -0.01
CCDC171-206ENST00000474193 C12orf77C9JDV5 145 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 NPIPB11E5RHQ5 1161 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 J3QR06 171 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 SDCBPO00560 298 aaPredicted RBP14.95□□□□□ -0.02
CCDC171-206ENST00000474193 HBZP02008 142 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 FAM106CPP0CH98 169 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 DTYMKP23919 212 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 GDNFP39905 211 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 KIR2DS1Q14954 304 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 Q8N2B8 174 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 TOMM40LQ969M1 308 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 LINC00574Q9H8X3 128 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 ZNF702PQ9H963 129 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 Q9N2K0 584 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 GNG12Q9UBI6 72 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 A3GALT2U3KPV4 340 aa14.95□□□□□ -0.02
CCDC171-206ENST00000474193 TET2Q6N021 2002 aaPredicted RBP14.95□□□□□ -0.02
CCDC171-206ENST00000474193 PKD1L1Q8TDX9 2849 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 A6NHS1 94 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 C15orf65H3BRN8 121 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 M0QZK8 103 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 FCGR3AP08637 254 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 VDAC2P45880 294 aaPredicted RBP14.94□□□□□ -0.02
CCDC171-206ENST00000474193 CBX5P45973 191 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 MADCAM1Q13477 382 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 FOXB2Q5VYV0 432 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 ZNF880Q6PDB4 577 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 LAX1Q8IWV1 398 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 C11orf44Q8N8P7 122 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 OR52M1Q8NGK5 317 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 OR10X1Q8NGY0 326 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 FAM110DQ8TAY7 271 aaPredicted RBP14.94□□□□□ -0.02
CCDC171-206ENST00000474193 NUDCD2Q8WVJ2 157 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 IL1F10Q8WWZ1 152 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 DIRAS2Q96HU8 199 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 CYYR1Q96J86 154 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 ST6GALNAC5Q9BVH7 336 aa14.94□□□□□ -0.02
CCDC171-206ENST00000474193 NXF2Q9GZY0 626 aaKnown RBP14.94□□□□□ -0.02
CCDC171-206ENST00000474193 TRDCB7Z8K6 153 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 FBXO24O75426 580 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 PRSS3P35030 304 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 RAB7AP51149 207 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 HLA-DRB3P79483 266 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 HMGN3Q15651 99 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 SRSF7Q16629 238 aaKnown RBP eCLIP14.93□□□□□ -0.02
CCDC171-206ENST00000474193 OR1L1Q8NH94 360 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 UBALD1Q8TB05 177 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 SLC25A33Q9BSK2 321 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 OR2S2Q9NQN1 319 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 RABL2AQ9UBK7 228 aaPredicted RBP14.93□□□□□ -0.02
CCDC171-206ENST00000474193 ELF5Q9UKW6 265 aaPredicted RBP14.93□□□□□ -0.02
CCDC171-206ENST00000474193 RABL2BQ9UNT1 228 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 PSG11Q9UQ72 335 aa14.93□□□□□ -0.02
CCDC171-206ENST00000474193 HSPA12AO43301 675 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 RGS11O94810 467 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 TPPPO94811 219 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 OR2F2O95006 317 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 CD24P25063 80 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 GNG10P50151 68 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 BLCAPP62952 87 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 HABP2Q14520 560 aaPredicted RBP14.92□□□□□ -0.02
CCDC171-206ENST00000474193 STEAP3Q658P3 488 aa14.92□□□□□ -0.02
CCDC171-206ENST00000474193 CNIH2Q6PI25 160 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms