RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 F2RP25116 425 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 PPIFP30405 207 aaKnown RBP4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 LHX2P50458 406 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 RPL32P62910 135 aaKnown RBP4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 SEC11AP67812 179 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 EWSR1Q01844 656 aaKnown RBP eCLIP4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 FOXI2Q6ZQN5 318 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 FA2HQ7L5A8 372 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ERASQ7Z444 233 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 TUSC5Q8IXB3 177 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 OR10X1Q8NGY0 326 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM45BQ96B21 275 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 WDR34Q96EX3 536 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 GPR82Q96P67 336 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 AP1S3Q96PC3 154 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ATP5SQ99766 215 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 EFCAB11Q9BUY7 163 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ATG10Q9H0Y0 220 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 KCNK15Q9H427 330 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 MMP25Q9NPA2 562 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 KCNIP1Q9NZI2 227 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 LHX3Q9UBR4 397 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 BOKQ9UMX3 212 aaPredicted RBP4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 TRAV38-1A0A0B4J264 116 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 LRRC3CA6NJW4 275 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ANKRD30BLA7E2S9 258 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 GRXCR1A8MXD5 290 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 PATE3B3GLJ2 98 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 DNPH1O43598 174 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 NUDT3O95989 172 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 HBZP02008 142 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 FMODQ06828 376 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 SRSF6Q13247 344 aaKnown RBP4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 C1orf100Q5SVJ3 147 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 OR4C11Q6IEV9 310 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 LCN10Q6JVE6 187 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM64Q6YI46 380 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF788Q6ZQV5 615 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF808Q8N4W9 903 aaPredicted RBP4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 GVQW1Q8N7I0 195 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 OR52E2Q8NGJ4 325 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 BLNKQ8WV28 456 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 TM2D1Q9BX74 207 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ERG28Q9UKR5 140 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 DOCK4Q8N1I0 1966 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 TRBV9A0A0B4J1U6 114 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 MUC21A0A0G2JKD1 596 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 MUC21A0A140T8X8 626 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 GRIFINA4D1Z8 144 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 FBLL1A6NHQ2 334 aaKnown RBP4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 ZFP92A6NM28 416 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 H0YJW9 148 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 SH2D1BO14796 132 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 SIVA1O15304 175 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 ACTL6BO94805 426 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 CNIH1O95406 144 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 HPNP05981 417 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 KLK1P06870 262 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 C3orf79P0CE67 100 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 SRD5A2P31213 254 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 ASCL1P50553 236 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 PLCXD2Q0VAA5 305 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 CEACAM21Q3KPI0 293 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF585BQ52M93 769 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 MUC21Q5SSG8 566 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 GLYATL3Q5SZD4 288 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 C17orf99Q6UX52 265 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 DOLPP1Q86YN1 238 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 OR52E5Q8NH55 327 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 SCAMP5Q8TAC9 235 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 DOK4Q8TEW6 326 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 KLK6Q92876 244 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 KCNS1Q96KK3 526 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 PRSS27Q9BQR3 290 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 UBE2ZQ9H832 354 aaPredicted RBP4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 CRLS1Q9UJA2 301 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF391Q9UJN7 358 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 A0A0J9YY10 115 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 A0A1B0GX78 115 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 C7orf71A4D174 169 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 CEBPZOSA8MTT3 80 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 SLC33A1O00400 549 aaPredicted RBP4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 PAX4O43316 350 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 DHHO43323 396 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF728P0DKX0 622 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 AMTP48728 403 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 MEF2BQ02080 365 aaPredicted RBP4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 EGR4Q05215 589 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 FHL3Q13643 280 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 GABRA6Q16445 453 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 OR10J3Q5JRS4 329 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 FAM78BQ5VT40 261 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 Q6ZSR6 202 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 YRDCQ86U90 279 aaKnown RBP4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 UBE2E3Q969T4 207 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 BORCS7Q96B45 105 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 VCX2Q9H322 139 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 WDR54Q9H977 334 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 SPANXA1Q9NS26 97 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms