RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 STUMQ69YW2 141 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 TMEM65Q6PI78 240 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 ACOT7LQ6ZUV0 252 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 ZNF695Q8IW36 515 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 ASB13Q8WXK3 278 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 BSCL2Q96G97 398 aaPredicted RBP5.18□□□□□ -1.58
CLK1-210ENST00000473565 ZNF471Q9BX82 626 aaPredicted RBP5.18□□□□□ -1.58
CLK1-210ENST00000473565 MAGT1Q9H0U3 335 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 NPIPB11E5RHQ5 1161 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 FCN3O75636 299 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 IRF2P14316 349 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 F2RP25116 425 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 RPL30P62888 115 aaKnown RBP5.18□□□□□ -1.58
CLK1-210ENST00000473565 CYCSP99999 105 aaKnown RBP5.18□□□□□ -1.58
CLK1-210ENST00000473565 PRSS54Q6PEW0 395 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 KCNRGQ8N5I3 272 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 INO80EQ8NBZ0 244 aaPredicted RBP5.18□□□□□ -1.58
CLK1-210ENST00000473565 SNX22Q96L94 193 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 CITED4Q96RK1 184 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 SMIM3Q9BZL3 60 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 PSG11Q9UQ72 335 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 RNF115Q9Y4L5 304 aa5.18□□□□□ -1.58
CLK1-210ENST00000473565 LRRK2Q5S007 2527 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 SPG11Q96JI7 2443 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 RPS10-NUDT3A0A1W2PQS6 291 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 KANTRA0A1W2PQU2 76 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 F5H0A9 414 aaPredicted RBP5.17□□□□□ -1.58
CLK1-210ENST00000473565 MGST3O14880 152 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 RAMP3O60896 148 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 IGKV1-39P01597 117 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 IGKV1D-39P04432 117 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 NDUFB7P17568 137 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 P2RX3P56373 397 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 RND3P61587 244 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 TFF3Q07654 80 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 FBXL19-AS1Q494R0 122 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 CXorf66Q5JRM2 361 aaPredicted RBP5.17□□□□□ -1.58
CLK1-210ENST00000473565 LYPD2Q6UXB3 125 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 TCF23Q7RTU1 214 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 LRTM2Q8N967 370 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 BVESQ8NE79 360 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 FAM222BQ8WU58 562 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 NINJ1Q92982 152 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 CNTNAP3BQ96NU0 1288 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 CNTNAP3Q9BZ76 1288 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 FAM234AQ9H0X4 552 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 ZNRD1Q9P1U0 126 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 GNG12Q9UBI6 72 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 UBQLN2Q9UHD9 624 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 ARHGAP32A7KAX9 2087 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 K7EPK0 472 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 SLC31A2O15432 143 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 BCL2L11O43521 198 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 MMP23AO75900 390 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 CDS2O95674 445 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 IFNA7P01567 189 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 TNFRSF1AP19438 455 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 UCP1P25874 307 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 FAM185AQ8N0U4 392 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 FAM71E2Q8N5Q1 922 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 Q8TCH9 128 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 ST8SIA2Q92186 375 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 TMEM56Q96MV1 263 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 TMEM56-RWDD3S4R434 201 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 MALRD1Q5VYJ5 2156 aa5.17□□□□□ -1.58
CLK1-210ENST00000473565 CELSR2Q9HCU4 2923 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 FAM208BQ5VWN6 2430 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 A0A0D9SG52 128 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 H0Y980 276 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 SPINT2O43291 252 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 OR2F2O95006 317 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 CLDN14O95500 239 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 SERPINE2P07093 398 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 NFYBP25208 207 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 APOBEC3AP31941 199 aaPredicted RBP5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF134P52741 427 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 POLR2GP62487 172 aaKnown RBP eCLIP5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF816Q0VGE8 651 aaPredicted RBP5.16□□□□□ -1.58
CLK1-210ENST00000473565 OR2F1Q13607 317 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 Q3ZCU0 254 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF585BQ52M93 769 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF788Q6ZQV5 615 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 Q6ZRM9 215 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 MUC15Q8N387 334 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 RBPMSQ93062 196 aaKnown RBP5.16□□□□□ -1.58
CLK1-210ENST00000473565 SDSLQ96GA7 329 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 CXorf58Q96LI9 332 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 EGLN1Q9GZT9 426 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZC4H2Q9NQZ6 224 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 TMEM106BQ9NUM4 274 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 CALYQ9NYX4 217 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 RCL1Q9Y2P8 373 aaKnown RBP5.16□□□□□ -1.58
CLK1-210ENST00000473565 A0A1W2PPR1 153 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 TMEM178BH3BS89 294 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 C19orf84I3L1E1 186 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 DEDDO75618 318 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 CD55P08174 381 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 HKR1P10072 659 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 LOXP28300 417 aaPredicted RBP5.16□□□□□ -1.58
CLK1-210ENST00000473565 PRB3Q04118 309 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms