RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TSPAN15O95858 294 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 RPL30P62888 115 aaKnown RBP12.62□□□□□ -0.39
UBXN11-213ENST00000472155 VAMP2P63027 116 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 HMGN3Q15651 99 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 ACP7Q6ZNF0 438 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 Q8IYB0 196 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 PKDREJQ9NTG1 2253 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 C1QTNF9BB2RNN3 333 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 IGLV1-44P01699 117 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 SNCAP37840 140 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 LTC4SQ16873 150 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 VHLLQ6RSH7 139 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 BTNL3Q6UXE8 466 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 BHLHA15Q7RTS1 189 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-213ENST00000472155 ZADH2Q8N4Q0 377 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 PLEKHF2Q9H8W4 249 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 ZNF891A8MT65 544 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-213ENST00000472155 ATP6V1G2-DDX39BF2Z307 99 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 TXNL1O43396 289 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 IGHV3-7P01780 117 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 MDH2P40926 338 aaKnown RBP12.61□□□□□ -0.39
UBXN11-213ENST00000472155 GABRA2P47869 451 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 COL10A1Q03692 680 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 ARL16Q0P5N6 197 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 CD177Q8N6Q3 437 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 OR2G3Q8NGZ4 309 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 RNASE11Q8TAA1 199 aaKnown RBP12.61□□□□□ -0.39
UBXN11-213ENST00000472155 S100PBPQ96BU1 408 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 SPIN2AQ99865 258 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 SPIN2BQ9BPZ2 258 aa12.61□□□□□ -0.39
UBXN11-213ENST00000472155 OR5H1A6NKK0 313 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 NPIPB11E5RHQ5 1161 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBXN11-213ENST00000472155 HBZP02008 142 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 OR2Z1Q8NG97 314 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 OR13A1Q8NGR1 328 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 RARRES2Q99969 163 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 BCL2L14Q9BZR8 327 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 CXXC4Q9H2H0 198 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 TREM2Q9NZC2 230 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 FBXO7Q9Y3I1 522 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 SLC25A15Q9Y619 301 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 IGHV3OR15-7A0A075B7D8 119 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 AHRRA9YTQ3 701 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 K7N7A8 449 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 KLK10O43240 276 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 BRWD1-AS2P59051 145 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 FAM201AQ5SY85 155 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 UTF1Q5T230 341 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 RBMXL3Q8N7X1 1067 aaKnown RBP12.6□□□□□ -0.39
UBXN11-213ENST00000472155 CLRN3Q8NCR9 226 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 ZFP57Q9NU63 452 aa12.6□□□□□ -0.39
UBXN11-213ENST00000472155 NUDT19A8MXV4 375 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 M0R1B8 84 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 PVALBP20472 110 aaPredicted RBP12.59□□□□□ -0.39
UBXN11-213ENST00000472155 DVL1P1P54792 670 aaPredicted RBP12.59□□□□□ -0.39
UBXN11-213ENST00000472155 EDDM3AQ14507 147 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 HNF4GQ14541 408 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 C20orf24Q9BUV8 137 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 DSCAMO60469 2012 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 TMEM210A6NLX4 147 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 KITLGP21583 273 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 LMO1P25800 156 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 ZNF816Q0VGE8 651 aaPredicted RBP12.59□□□□□ -0.39
UBXN11-213ENST00000472155 GUK1Q16774 197 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 C1orf162Q8NEQ5 155 aaPredicted RBP12.59□□□□□ -0.39
UBXN11-213ENST00000472155 LRRC29Q8WV35 223 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 ABHD14BQ96IU4 210 aa12.59□□□□□ -0.39
UBXN11-213ENST00000472155 EIF5A2Q9GZV4 153 aaKnown RBP12.59□□□□□ -0.39
UBXN11-213ENST00000472155 MBD3L4A6NDZ8 208 aaPredicted RBP12.58□□□□□ -0.39
UBXN11-213ENST00000472155 MBD3L3A6NE82 208 aaPredicted RBP12.58□□□□□ -0.39
UBXN11-213ENST00000472155 MBD3L5A6NJ08 208 aaPredicted RBP12.58□□□□□ -0.39
UBXN11-213ENST00000472155 GCH1P30793 250 aa12.58□□□□□ -0.39
UBXN11-213ENST00000472155 ZNF718Q3SXZ3 478 aa12.58□□□□□ -0.39
UBXN11-213ENST00000472155 SHEQ5VZ18 495 aa12.58□□□□□ -0.39
UBXN11-213ENST00000472155 MOB1BQ7L9L4 216 aa12.58□□□□□ -0.39
UBXN11-213ENST00000472155 HAPLN4Q86UW8 402 aa12.58□□□□□ -0.39
UBXN11-213ENST00000472155 MBD3L2Q8NHZ7 208 aaPredicted RBP12.58□□□□□ -0.39
UBXN11-213ENST00000472155 IL22RA2Q969J5 263 aa12.58□□□□□ -0.39
UBXN11-213ENST00000472155 TMEM30CPA0ZSE6 113 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 ATXN7O15265 892 aaPredicted RBP12.58□□□□□ -0.4
UBXN11-213ENST00000472155 METTL15P1P0C7V9 234 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 DAOP14920 347 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 RPS16P62249 146 aaKnown RBP12.58□□□□□ -0.4
UBXN11-213ENST00000472155 IGF2-ASQ6U949 168 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 NBASA2RRP1 2371 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 SELLP14151 372 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 IL2RGP31785 369 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 G6PCP35575 357 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 KRBOX4Q5JUW0 171 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 GALMQ96C23 342 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 AIFM2Q9BRQ8 373 aa12.58□□□□□ -0.4
UBXN11-213ENST00000472155 TACC2O95359 2948 aa12.57□□□□□ -0.4
UBXN11-213ENST00000472155 LRBAP50851 2863 aa12.57□□□□□ -0.4
UBXN11-213ENST00000472155 IGF2RP11717 2491 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms