RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 ZNF729A6NN14 1252 aaPredicted RBP21.48■■□□□ 1.03
U2AF1-208ENST00000471250 MPTX1A8MV57 137 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 YPEL1O60688 119 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 IFNA21P01568 189 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 RNF224P0DH78 156 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 F2RP25116 425 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 LOXL3P58215 753 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 MEF2CQ06413 473 aaPredicted RBP21.48■■□□□ 1.03
U2AF1-208ENST00000471250 MSMO1Q15800 293 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 LTC4SQ16873 150 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 LRRC10Q5BKY1 277 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 GGNBP1Q5YKI7 109 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 ZNF645Q8N7E2 425 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 ZBTB34Q8NCN2 500 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 LHFPL5Q8TAF8 219 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 YPEL2Q96QA6 119 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 LINC00574Q9H8X3 128 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 CTSZQ9UBR2 303 aa21.48■■□□□ 1.03
U2AF1-208ENST00000471250 H0Y980 276 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 B3GALNT1O75752 331 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 IGHV2-70P01814 119 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 UCP1P25874 307 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 LGALSLQ3ZCW2 172 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-208ENST00000471250 MORN2Q502X0 79 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 DRAM1Q8N682 238 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 FAM216AQ8WUB2 273 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 PPP1R1CQ8WVI7 109 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 TMEM56Q96MV1 263 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 KLF2Q9Y5W3 355 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-208ENST00000471250 LINC00312Q9Y6C7 94 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 TMEM56-RWDD3S4R434 201 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 HMSDA8MTL9 139 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 ZBTB8BQ8NAP8 495 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-208ENST00000471250 EDARADDQ8WWZ3 215 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 OR2D2Q9H210 308 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 TAS2R3Q9NYW6 316 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 GNG12Q9UBI6 72 aa21.47■■□□□ 1.03
U2AF1-208ENST00000471250 SNAPC5O75971 98 aa21.46■■□□□ 1.03
U2AF1-208ENST00000471250 RNF150Q9ULK6 438 aa21.46■■□□□ 1.03
U2AF1-208ENST00000471250 SMG1Q96Q15 3661 aaKnown RBP21.45■■□□□ 1.03
U2AF1-208ENST00000471250 DVL1O14640 695 aa21.45■■□□□ 1.02
U2AF1-208ENST00000471250 SLC25A4P12235 298 aa21.45■■□□□ 1.02
U2AF1-208ENST00000471250 IFITM2Q01629 132 aa21.45■■□□□ 1.02
U2AF1-208ENST00000471250 IL15RAQ13261 267 aa21.45■■□□□ 1.02
U2AF1-208ENST00000471250 LYZL2Q7Z4W2 148 aa21.45■■□□□ 1.02
U2AF1-208ENST00000471250 C19orf12Q9NSK7 152 aa21.45■■□□□ 1.02
U2AF1-208ENST00000471250 IDI2-AS1Q9NZ38 188 aa21.45■■□□□ 1.02
U2AF1-208ENST00000471250 FXYD6-FXYD2A0A087WZ82 144 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 CDS2O95674 445 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 OMGP23515 440 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 RPL31P62899 125 aaKnown RBP21.44■■□□□ 1.02
U2AF1-208ENST00000471250 TMEM30BQ3MIR4 351 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 TMEM268Q5VZI3 342 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 C11orf87Q6NUJ2 197 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 SELENOHQ8IZQ5 122 aaKnown RBP21.44■■□□□ 1.02
U2AF1-208ENST00000471250 GFOD1Q9NXC2 390 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 LPAR3Q9UBY5 353 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 DAOP14920 347 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 PSMB6P28072 239 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 IAH1Q2TAA2 248 aaPredicted RBP21.44■■□□□ 1.02
U2AF1-208ENST00000471250 LRRC37A5PQ49AS3 106 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 ZNF695Q8IW36 515 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 OR51H1Q8NH63 302 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 IL22RA2Q969J5 263 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 C5orf30Q96GV9 206 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 AGMATQ9BSE5 352 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 TMED3Q9Y3Q3 217 aa21.44■■□□□ 1.02
U2AF1-208ENST00000471250 ITGB1BP1O14713 200 aa21.43■■□□□ 1.02
U2AF1-208ENST00000471250 LY6HO94772 140 aa21.43■■□□□ 1.02
U2AF1-208ENST00000471250 MPC2O95563 127 aa21.43■■□□□ 1.02
U2AF1-208ENST00000471250 EIF4EBP1Q13541 118 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-208ENST00000471250 SLC35G3Q8N808 338 aa21.43■■□□□ 1.02
U2AF1-208ENST00000471250 PSG11Q9UQ72 335 aa21.43■■□□□ 1.02
U2AF1-208ENST00000471250 DUXBA0A1W2PPF3 345 aa21.42■■□□□ 1.02
U2AF1-208ENST00000471250 ST8SIA5O15466 376 aa21.42■■□□□ 1.02
U2AF1-208ENST00000471250 ZNF273Q14593 569 aa21.42■■□□□ 1.02
U2AF1-208ENST00000471250 TMEM65Q6PI78 240 aa21.42■■□□□ 1.02
U2AF1-208ENST00000471250 OR52M1Q8NGK5 317 aa21.42■■□□□ 1.02
U2AF1-208ENST00000471250 SPOCK3Q9BQ16 436 aa21.42■■□□□ 1.02
U2AF1-208ENST00000471250 RNF212BA8MTL3 300 aa21.41■■□□□ 1.02
U2AF1-208ENST00000471250 CXCL2P19875 107 aa21.41■■□□□ 1.02
U2AF1-208ENST00000471250 TMEM200BQ69YZ2 307 aa21.41■■□□□ 1.02
U2AF1-208ENST00000471250 OR10A7Q8NGE5 316 aa21.41■■□□□ 1.02
U2AF1-208ENST00000471250 H1FXQ92522 213 aaKnown RBP21.41■■□□□ 1.02
U2AF1-208ENST00000471250 GAL3ST2Q9H3Q3 398 aa21.41■■□□□ 1.02
U2AF1-208ENST00000471250 THAP6Q8TBB0 222 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 RAB1CQ92928 201 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 RBPMSQ93062 196 aaKnown RBP21.4■■□□□ 1.02
U2AF1-208ENST00000471250 ABHD14BQ96IU4 210 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 GON7Q9BXV9 100 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 PLEKHF2Q9H8W4 249 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 LIN7CQ9NUP9 197 aaKnown RBP21.4■■□□□ 1.02
U2AF1-208ENST00000471250 GSKIPQ9P0R6 139 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 RALYQ9UKM9 306 aaKnown RBP21.4■■□□□ 1.02
U2AF1-208ENST00000471250 ARPC5O15511 151 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 CDKN1AP38936 164 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 AVPI1Q5T686 147 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 TIMD4Q96H15 378 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 SLA2Q9H6Q3 261 aa21.4■■□□□ 1.02
U2AF1-208ENST00000471250 SDHAF2Q9NX18 166 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms