RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CALYQ9NYX4 217 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 CLDN25C9JDP6 229 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 TRAPPC2LH3BP13 241 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 H3BQF6 201 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 FAAHO00519 579 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 AIM2O14862 343 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 TRAF3IP2O43734 574 aaPredicted RBP3.89□□□□□ -1.79
CKS1B-204ENST00000471245 EIF1BO60739 113 aaKnown RBP3.89□□□□□ -1.79
CKS1B-204ENST00000471245 SHOX2O60902 331 aaPredicted RBP3.89□□□□□ -1.79
CKS1B-204ENST00000471245 CLPXO76031 633 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 HLA-HP01893 362 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 KRT16P08779 473 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 CBR1P16152 277 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 PRPS1L1P21108 318 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 FMO3P31513 532 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 GLRXP35754 106 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 CDKN2CP42773 168 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 GPR4P46093 362 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 POLR2HP52434 150 aaKnown RBP3.89□□□□□ -1.79
CKS1B-204ENST00000471245 NAA20P61599 178 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 CASP8Q14790 479 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 CCDC153Q494R4 210 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM255AQ5JRV8 349 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 MRPL2Q5T653 305 aaKnown RBP3.89□□□□□ -1.79
CKS1B-204ENST00000471245 DEGS2Q6QHC5 323 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 ASCL4Q6XD76 172 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 IL34Q6ZMJ4 242 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF836Q6ZNA1 936 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF620Q6ZNG0 422 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 TRMT10CQ7L0Y3 403 aaKnown RBP3.89□□□□□ -1.79
CKS1B-204ENST00000471245 FAM122BQ7Z309 247 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 JAGN1Q8N5M9 183 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 ASCC1Q8N9N2 400 aaKnown RBP3.89□□□□□ -1.79
CKS1B-204ENST00000471245 OR1S2Q8NGQ3 325 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 OR2G2Q8NGZ5 317 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 OR52E5Q8NH55 327 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 DCUN1D4Q92564 292 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 ARPC1AQ92747 370 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 NEURL3Q96EH8 262 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 TEX37Q96LM6 180 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 TSPAN32Q96QS1 320 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 SLC29A1Q99808 456 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 NRIP2Q9BQI9 281 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 SIAEQ9HAT2 523 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 SLC17A7Q9P2U7 560 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 SLC35A3Q9Y2D2 325 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 CACNG2Q9Y698 323 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 DNAH7Q8WXX0 4024 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 RYR2Q92736 4967 aa3.89□□□□□ -1.79
CKS1B-204ENST00000471245 IGHV1-69-2A0A0G2JMI3 117 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 A0A1W2PRD5 423 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 C5orf63A6NC05 138 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 FAM231BA6NCW3 169 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM114B3SHH9 223 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 RPL36A-HNRNPH2H7BZ11 118 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 M0R3G1 203 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 COPEO14579 308 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
CKS1B-204ENST00000471245 SIVA1O15304 175 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 FOXH1O75593 365 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 FCN3O75636 299 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 CPSF4O95639 269 aaKnown RBP3.88□□□□□ -1.79
CKS1B-204ENST00000471245 CRYBA1P05813 215 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF35P13682 527 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF14P17017 642 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-204ENST00000471245 SLC2A5P22732 501 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 FKBP2P26885 142 aaKnown RBP3.88□□□□□ -1.79
CKS1B-204ENST00000471245 ARR3P36575 388 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 UGT2B15P54855 530 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 AQP5P55064 265 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 CCL8P80075 99 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 HOXC5Q00444 222 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 CKAP4Q07065 602 aaKnown RBP3.88□□□□□ -1.79
CKS1B-204ENST00000471245 WHAMMP3Q1A5X7 153 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 RNF212Q495C1 297 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 SPRNQ5BIV9 151 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 CTRB2Q6GPI1 263 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 LHFPL3Q86UP9 236 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 COMTD1Q86VU5 262 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF584Q8IVC4 421 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 PNKDQ8N490 385 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 MNS1Q8NEH6 495 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 OR8J2Q8NGG1 315 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 OR52E2Q8NGJ4 325 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 OR4A15Q8NGL6 344 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 NDNFQ8TB73 568 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 DDIT4LQ96D03 193 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 PPP1R36Q96LQ0 422 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 PPP3R2Q96LZ3 170 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 ECSITQ9BQ95 431 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 LINC00470Q9BZP3 86 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 C20orf27Q9GZN8 174 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 UBAP1Q9NZ09 502 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 XCL2Q9UBD3 114 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 INSIG2Q9Y5U4 225 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 DSPPQ9NZW4 1301 aa3.88□□□□□ -1.79
CKS1B-204ENST00000471245 HUWE1Q7Z6Z7 4374 aaKnown RBP3.87□□□□□ -1.79
CKS1B-204ENST00000471245 IGKV1D-42A0A075B6H8 117 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms