RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GPR141Q7Z602 305 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 CCDC28AQ8IWP9 274 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 DYNAPQ8N1N2 210 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 PRR18Q8N4B5 295 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 MS4A15Q8N5U1 240 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 NANOGP1Q8N7R0 232 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 ZNF680Q8NEM1 530 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 OR51T1Q8NGJ9 327 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 OR13A1Q8NGR1 328 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 CCDC107Q8WV48 283 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 TMEM203Q969S6 136 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 COQ2Q96H96 371 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 NEDD4LQ96PU5 975 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 NEURL2Q9BR09 285 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 MCRIP2Q9BUT9 160 aaKnown RBP4.61□□□□□ -1.67
VARS-222ENST00000470953 TMEM59Q9BXS4 323 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 GON7Q9BXV9 100 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 ANKRD60Q9BZ19 345 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 SELENOIQ9C0D9 397 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 PRSS22Q9GZN4 317 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 BANF2Q9H503 90 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 CHMP1AQ9HD42 196 aaPredicted RBP4.61□□□□□ -1.67
VARS-222ENST00000470953 IDI2-AS1Q9NZ38 188 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 IL36GQ9NZH8 169 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 KCNIP1Q9NZI2 227 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 DPM3Q9P2X0 92 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 GNG12Q9UBI6 72 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 TRAPPC2LQ9UL33 140 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 TCF19Q9Y242 345 aa4.61□□□□□ -1.67
VARS-222ENST00000470953 TNCP24821 2201 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 TRBV5-7A0A0A0MS05 114 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 TRAV39A0A0B4J263 110 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 A6NDX4 124 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 CLN5O75503 358 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 MMP23AO75900 390 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 ARL6IP5O75915 188 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 UBBP0CG47 229 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 PRB4P10163 310 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 JUNBP17275 347 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 IGFBP3P17936 291 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 MYL9P24844 172 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 SOX6P35712 828 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 EIF2B2P49770 351 aaKnown RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 AP2S1P53680 142 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 RAB14P61106 215 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 MADCAM1Q13477 382 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 TRAM1Q15629 374 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 HLA-DRB5Q30154 266 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 ACSM3Q53FZ2 586 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 NHLRC3Q5JS37 347 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 C9orf152Q5JTZ5 239 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 TPTE2P1Q5T6R2 138 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 RSBN1Q5VWQ0 802 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 RAB12Q6IQ22 244 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 TRAT1Q6PIZ9 186 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 C8orf86Q6ZUL3 223 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 ZNF367Q7RTV3 350 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 CEACAM19Q7Z692 300 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 CENPVQ7Z7K6 275 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 SLC38A6Q8IZM9 456 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 SVOPQ8N4V2 548 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 C11orf42Q8N5U0 333 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 OR4P4Q8NGL7 312 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 OR9G1Q8NH87 305 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 RFESDQ8TAC1 157 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 IL17DQ8TAD2 202 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 LHFPL5Q8TAF8 219 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 PLPPR1Q8TBJ4 325 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 SETD6Q8TBK2 473 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 CHPT1Q8WUD6 406 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 FBLIM1Q8WUP2 373 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 NRG4Q8WWG1 115 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 PHYHIPQ92561 330 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 LEAP2Q969E1 77 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 BORCS5Q969J3 196 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 ARL11Q969Q4 196 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 MRPS24Q96EL2 167 aaKnown RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 KIRREL1Q96J84 757 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 P2RX4Q99571 388 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 ZNF286AQ9HBT8 521 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 GHRLQ9UBU3 117 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 ZNF256Q9Y2P7 627 aaPredicted RBP4.6□□□□□ -1.67
VARS-222ENST00000470953 CBY1Q9Y3M2 126 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 PEX16Q9Y5Y5 336 aa4.6□□□□□ -1.67
VARS-222ENST00000470953 FAT1Q14517 4588 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 A0A1W2PP11 408 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 UBE2QL1A1L167 161 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A10PA6NDY2 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A20PA6NIJ5 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A8PA6NJQ4 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A7PA6NKC0 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A22PA8MWA6 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A12PA8MX19 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 FAM90A23PA8MXZ1 464 aa4.59□□□□□ -1.67
VARS-222ENST00000470953 OOSP1A8MZH6 123 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms