RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 GVQW1Q8N7I0 195 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 MAPK1IP1LQ8NDC0 245 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 WFDC11Q8NEX6 87 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 TMEM185AQ8NFB2 350 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 OR56B4Q8NH76 319 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 MRPL30Q8TCC3 161 aaKnown RBP3.89□□□□□ -1.79
SF3B1-208ENST00000470268 GPX8Q8TED1 209 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 PHF21AQ96BD5 680 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 TIMD4Q96H15 378 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 MARVELD1Q9BSK0 173 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 DNTTIP1Q9H147 329 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 PATZ1Q9HBE1 687 aaKnown RBP3.89□□□□□ -1.79
SF3B1-208ENST00000470268 SPACA1Q9HBV2 294 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.89□□□□□ -1.79
SF3B1-208ENST00000470268 PLSCR3Q9NRY6 295 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 MCUBQ9NWR8 336 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 SLC25A10Q9UBX3 287 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-208ENST00000470268 GLS2Q9UI32 602 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 SERPINE3A8MV23 424 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FAM157AC9JC47 383 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 GABARAPH6UMI1 98 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 MGST3O14880 152 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 NDUFA2O43678 99 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 SCGNO76038 276 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CRYZL1O95825 349 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV2-5P01817 119 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CD3DP04234 171 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 TCRBP04435 133 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FCGR3AP08637 254 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 RCC1P18754 421 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CXCL3P19876 107 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ANXA7P20073 488 aaKnown RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 HLA-DMAP28067 261 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 EDDM3BP56851 147 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 UBE2MP61081 183 aaKnown RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 PAX5Q02548 391 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FCN2Q15485 313 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FAM189A2Q15884 450 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 WDR25Q64LD2 544 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 OR52W1Q6IF63 320 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF497Q6ZNH5 498 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 SLC36A1Q7Z2H8 476 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 SLC38A6Q8IZM9 456 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 MUC20Q8N307 709 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CIARTQ8N365 385 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 SPICQ8N5J4 248 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 OR52B4Q8NGK2 314 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 OR4C16Q8NGL9 310 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 OR13A1Q8NGR1 328 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 OR4K15Q8NH41 348 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 NEK7Q8TDX7 302 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CCDC107Q8WV48 283 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FCAMRQ8WWV6 532 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 SNAPC3Q92966 411 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CMSS1Q9BQ75 279 aaKnown RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 PIMREGQ9BSJ6 248 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FAM234AQ9H0X4 552 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 C19orf12Q9NSK7 152 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 KIF25Q9UIL4 384 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ITPR2Q14571 2701 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 NAV2Q8IVL1 2488 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ANKRD20A5PA0PJZ0 165 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 NKX6-3A6NJ46 265 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ARPC1BO15143 372 aaKnown RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CTDSPLO15194 276 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 NDUFB3O43676 98 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CA11O75493 328 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 SPDEFO95238 335 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 GLAP06280 429 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CGB3P0DN86 165 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CGB7P0DN87 165 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 NDUFB7P17568 137 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 PRSS3P35030 304 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 P2RX3P56373 397 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 DSCR9P59020 149 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 GNG2P59768 71 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 PITPNAQ00169 270 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 PAX2Q02962 417 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ARFRP1Q13795 201 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 RBM39Q14498 530 aaKnown RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF273Q14593 569 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 PNLIPRP3Q17RR3 467 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 Q5BKY6 102 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 KRBOX4Q5JUW0 171 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 UTF1Q5T230 341 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FAM53AQ6NSI3 398 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF880Q6PDB4 577 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 PRSS57Q6UWY2 283 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 TRAPPC6BQ86SZ2 158 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 C11orf42Q8N5U0 333 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 OR11H7Q8NGC8 314 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 UBALD1Q8TB05 177 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 Q96MF0 132 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 FOXC2Q99958 501 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 SEC22CQ9BRL7 303 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 C20orf85Q9H1P6 137 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 C12orf4Q9NQ89 552 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CLN8Q9UBY8 286 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 MTFP1Q9UDX5 166 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 MIOXQ9UGB7 285 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms