RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PLTPP55058 493 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 SKP1P63208 163 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 CTAG1AP78358 180 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 STX4Q12846 297 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 IGFBP7Q16270 282 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 CLLU1OSQ5K130 101 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 TMEM136Q6ZRR5 245 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 TRMT10CQ7L0Y3 403 aaKnown RBP2.65□□□□□ -1.99
LSM5-209ENST00000468872 CYP4Z1Q86W10 505 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 SGPP2Q8IWX5 399 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 ZDHHC22Q8N966 263 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 OR1P1Q8NH06 330 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 OR51Q1Q8NH59 317 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 GTF2H4Q92759 462 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 CCDC124Q96CT7 223 aaKnown RBP2.65□□□□□ -1.99
LSM5-209ENST00000468872 ZNF514Q96K75 400 aaPredicted RBP2.65□□□□□ -1.99
LSM5-209ENST00000468872 ZNF75AQ96N20 296 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 ZNF396Q96N95 335 aaPredicted RBP2.65□□□□□ -1.99
LSM5-209ENST00000468872 PLEKHA1Q9HB21 404 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 RDH14Q9HBH5 336 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 ABCB9Q9NP78 766 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 PARP11Q9NR21 331 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 NLE1Q9NVX2 485 aaPredicted RBP2.65□□□□□ -1.99
LSM5-209ENST00000468872 RBM22Q9NW64 420 aaKnown RBP eCLIP2.65□□□□□ -1.99
LSM5-209ENST00000468872 MAT2BQ9NZL9 334 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 ACANP16112 2415 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 MGAM2Q2M2H8 2515 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 KIAA1671Q9BY89 1806 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 KIR2DS1A0A191URI9 304 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 LOC389332A0A1B0GUA5 103 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 IZUMO1RA6ND01 250 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 hCG_2039718K7EN88 272 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 NRASP01111 189 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 HRASP01112 189 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 KRASP01116 189 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 IGLV7-43P04211 117 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 TPM3P06753 285 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 GP1BAP07359 652 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 SNRPAP09012 282 aaKnown RBP2.64□□□□□ -1.99
LSM5-209ENST00000468872 RNASE2P10153 161 aaKnown RBP2.64□□□□□ -1.99
LSM5-209ENST00000468872 TUFMP49411 452 aaKnown RBP2.64□□□□□ -1.99
LSM5-209ENST00000468872 IL15RAQ13261 267 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 ELOCQ15369 112 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 ZNF404Q494X3 552 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 UGT2A3Q6UWM9 527 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 NT5DC3Q86UY8 548 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 ZFP62Q8NB50 900 aaPredicted RBP2.64□□□□□ -1.99
LSM5-209ENST00000468872 OR2Y1Q8NGV0 311 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 OR5H2Q8NGV7 314 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 UBA3Q8TBC4 463 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 TMEM239Q8WW34 195 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 ITLN2Q8WWU7 325 aaPredicted RBP2.64□□□□□ -1.99
LSM5-209ENST00000468872 C22orf15Q8WYQ4 148 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 SEC22CQ9BRL7 303 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 FAM60AQ9NP50 221 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 TMEM38BQ9NVV0 291 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 HMGXB4Q9UGU5 601 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 ARAP2Q8WZ64 1704 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 DOCK3Q8IZD9 2030 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 BSNQ9UPA5 3926 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 DCHS2Q6V1P9 2916 aa2.64□□□□□ -1.99
LSM5-209ENST00000468872 VPS13CQ709C8 3753 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 TMEM131Q92545 1883 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 MYO16Q9Y6X6 1858 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 EDC4Q6P2E9 1401 aaKnown RBP2.63□□□□□ -1.99
LSM5-209ENST00000468872 C9JQL5 133 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 SMLR1H3BR10 107 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 GOLGA8RI6L899 631 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 FADS2O95864 444 aaKnown RBP2.63□□□□□ -1.99
LSM5-209ENST00000468872 S100A6P06703 90 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 MAGEA6P43360 314 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 ACOT2P49753 483 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 MYL6P60660 151 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 DSTNP60981 165 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 UBE2IP63279 158 aaKnown RBP2.63□□□□□ -1.99
LSM5-209ENST00000468872 TMEM69Q5SWH9 247 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 FA2HQ7L5A8 372 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 SERPINB11Q96P15 392 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 NXF2Q9GZY0 626 aaKnown RBP2.63□□□□□ -1.99
LSM5-209ENST00000468872 LHX5Q9H2C1 402 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 RBM12B-AS1Q9P1G2 102 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 CYB5R1Q9UHQ9 305 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 PUS1Q9Y606 427 aaKnown RBP eCLIP2.63□□□□□ -1.99
LSM5-209ENST00000468872 SLC22A7Q9Y694 548 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 BAZ2AQ9UIF9 1905 aaKnown RBP2.63□□□□□ -1.99
LSM5-209ENST00000468872 TSC2P49815 1807 aa2.63□□□□□ -1.99
LSM5-209ENST00000468872 RBFOX3A6NFN3 312 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 VGLL3A8MV65 326 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 TOR1AO14656 332 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 ITGB1BP1O14713 200 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 FSTL3O95633 263 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 CXorf1O96002 111 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 SLC35E2BP0CK96 405 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 SLC6A1P30531 599 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 XKP51811 444 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 UBE2G2P60604 165 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 SSX1Q16384 188 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 Q499Y3 187 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 CLEC12AQ5QGZ9 265 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 C1orf64Q8NEQ6 169 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms