RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 GIFP27352 417 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 PRDX2P32119 198 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 MDH2P40926 338 aaKnown RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 GPR6P46095 362 aaPredicted RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 CCR6P51684 374 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 COL10A1Q03692 680 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4L9Q6RFH8 374 aaPredicted RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 Q6ZTK2 550 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 SVBPQ8N300 66 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 BPIFB2Q8N4F0 458 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 CHST4Q8NCG5 386 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 ZNRF1Q8ND25 227 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 BEND2Q8NDZ0 799 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 OR11H4Q8NGC9 324 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 RAB3CQ96E17 227 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 TIMD4Q96H15 378 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 BPESC1Q9GZL8 116 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 METTL8Q9H825 291 aaKnown RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 PLEKHJ1Q9NW61 149 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4Q9UBX2 424 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 ABCA2Q9BZC7 2435 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 YLPM1P49750 1951 aaKnown RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 TRAV18A0A075B6X5 111 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 PDCD6O75340 191 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 SCGNO76038 276 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 NPSP0C0P6 89 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 PTHLHP12272 177 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 ANXA3P12429 323 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FUT3P21217 361 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 CHATP28329 748 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 PDLIM4P50479 330 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 HTD2P86397 168 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 IL18Q14116 193 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 ZNF674Q2M3X9 581 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 OLFML2AQ68BL7 652 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 LYPD2Q6UXB3 125 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 LDLRAD3Q86YD5 345 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 SUMF2Q8NBJ7 301 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 UXS1Q8NBZ7 420 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM168AQ92567 244 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 RAB1CQ92928 201 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 NINJ1Q92982 152 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 CCL13Q99616 98 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 MARVELD1Q9BSK0 173 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 CHST6Q9GZX3 395 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 BEX4Q9NWD9 120 aaPredicted RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 RCC2Q9P258 522 aaKnown RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 V9GYH0 126 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 A0A0A6YYH2 397 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 TMEM235A6NFC5 223 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 FABP12A6NFH5 140 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 A6NJ64 397 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 FSTL3O95633 263 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 HIST1H1DP16402 221 aaKnown RBP5.71□□□□□ -1.49
SCAF4-204ENST00000467731 LMO1P25800 156 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 RAB5CP51148 216 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 TAS2R20P59543 309 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 DMRTA1Q5VZB9 504 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 FAM131AQ6UXB0 335 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 ZNF788Q6ZQV5 615 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 FAM216BQ8N7L0 139 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 DYRK2Q92630 601 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 GAFA1Q96PS6 74 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 SULT4A1Q9BR01 284 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 FAAP24Q9BTP7 215 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 PECRQ9BY49 303 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 ZNF665Q9H7R5 613 aa5.71□□□□□ -1.49
SCAF4-204ENST00000467731 CEACAM18A8MTB9 384 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 MFNGO00587 321 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 TNFRSF13BO14836 293 aaPredicted RBP5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ADAM20O43506 726 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ZNF737O75373 536 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 IGHV2-5P01817 119 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 HLA-DQB1P01920 261 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ACTBP60709 375 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ACTG1P63261 375 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ATXN7L3Q14CW9 347 aaPredicted RBP5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ZNF260Q3ZCT1 412 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 PYY3Q5JQD4 70 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 LHFPL4Q7Z7J7 247 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 PDZD9Q8IXQ8 264 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 MUC20Q8N307 709 aaPredicted RBP5.71□□□□□ -1.5
SCAF4-204ENST00000467731 MRGPRDQ8TDS7 321 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 MBD6Q96DN6 1003 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 SDSLQ96GA7 329 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ABHD1Q96SE0 405 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ATG101Q9BSB4 218 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 ZNF2Q9BSG1 426 aaPredicted RBP5.71□□□□□ -1.5
SCAF4-204ENST00000467731 PIMREGQ9BSJ6 248 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 MED28Q9H204 178 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 CTSZQ9UBR2 303 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 HSF4Q9ULV5 492 aa5.71□□□□□ -1.5
SCAF4-204ENST00000467731 FLNAP21333 2647 aaKnown RBP5.71□□□□□ -1.5
SCAF4-204ENST00000467731 IGHV4-30-2A0A087WSY4 118 aa5.7□□□□□ -1.5
SCAF4-204ENST00000467731 UBE2QL1A1L167 161 aa5.7□□□□□ -1.5
SCAF4-204ENST00000467731 XKRY2A2RUG3 117 aa5.7□□□□□ -1.5
SCAF4-204ENST00000467731 DISC1C4P0D8 188 aa5.7□□□□□ -1.5
SCAF4-204ENST00000467731 MCRIP1C9JLW8 97 aa5.7□□□□□ -1.5
SCAF4-204ENST00000467731 SIGLEC5O15389 551 aa5.7□□□□□ -1.5
SCAF4-204ENST00000467731 MNDAP41218 407 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms