RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 TGIF2-C20orf24A0A0A6YYL0 155 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 TRAV20A0A0B4J274 112 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 B4DEV8 164 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 CEACAM4O75871 244 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 P4HA3Q7Z4N8 544 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 ZNF573Q86YE8 665 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 RPRMQ9NS64 109 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 CISD1Q9NZ45 108 aaKnown RBP12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 URGCP-MRPS24S4R325 110 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 DEGS1O15121 323 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 CNOT4O95628 575 aaKnown RBP12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 PLP2Q04941 152 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 ZNF674Q2M3X9 581 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 FAM209BQ5JX69 171 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 FBXW9Q5XUX1 488 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 OR10V1Q8NGI7 309 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 RSG1Q9BU20 258 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 OR1A1Q9P1Q5 309 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 GNG13Q9P2W3 67 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 ZMAT5Q9UDW3 170 aaKnown RBP12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 MPC1Q9Y5U8 109 aa12.47□□□□□ -0.41
PRPF38B-204ENST00000467302 OR5B21A6NL26 309 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 C3orf80F5H4A9 247 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BKO60814 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BJP06899 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BOP23527 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BBP33778 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BDP58876 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 GNG3P63215 75 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 ARL16Q0P5N6 197 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 TESK1Q15569 626 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 ZNF726P1Q15940 193 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 ACSF3Q4G176 576 aaPredicted RBP12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 Q6P435 159 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 ZNF525Q8N782 197 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 PSMG3Q9BT73 122 aaPredicted RBP12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 PKIBQ9C010 78 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 CACNG5Q9UF02 275 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 TINAGQ9UJW2 476 aa12.46□□□□□ -0.41
PRPF38B-204ENST00000467302 CNOT1A5YKK6 2376 aaKnown RBP12.46□□□□□ -0.42
PRPF38B-204ENST00000467302 LRP5LA4QPB2 252 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 ANKRD30BLA7E2S9 258 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 SYNGR2O43760 224 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 IGKV1-5P01602 117 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 BCL2P10415 239 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 CD200P41217 278 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 WNT5AP41221 380 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 NDUFA6P56556 154 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 SLC25A24Q6NUK1 477 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 HAPLN4Q86UW8 402 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 OR13D1Q8NGV5 346 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 GMPPAQ96IJ6 420 aaPredicted RBP12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 OR51I2Q9H344 312 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 VSIRQ9H7M9 311 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 CELSR3Q9NYQ7 3312 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 AQP7O14520 342 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 RHBDL1O75783 438 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 SPINK2P20155 84 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 PYY3Q5JQD4 70 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 OR1K1Q8NGR3 316 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 ZNF665Q9H7R5 613 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 OR14J1Q9UGF5 321 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 RNF150Q9ULK6 438 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 DMRT1Q9Y5R6 373 aa12.45□□□□□ -0.42
PRPF38B-204ENST00000467302 CYB5BO43169 146 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 IL18BPO95998 194 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 RND2P52198 227 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 RAB11AP62491 216 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 PNRC1Q12796 327 aaPredicted RBP12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 SPNS3Q6ZMD2 512 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 SCGB1C1Q8TD33 95 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 BCL2L2Q92843 193 aaPredicted RBP12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 PSENENQ9NZ42 101 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 TREM2Q9NZC2 230 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 TRGC2P03986 189 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 IAPPP10997 89 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 APLNRP35414 380 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 SERF2P84101 59 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 LRRC75BQ2VPJ9 315 aa12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 RNASE11Q8TAA1 199 aaKnown RBP12.44□□□□□ -0.42
PRPF38B-204ENST00000467302 RCC1LQ96I51 464 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms