RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 IGHV3OR15-7A0A075B7D8 119 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 MEIKINA0A087WXM9 373 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 TRGV10A0A0A0MS01 117 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 A0A0B4J2A0 478 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 IGKV1-6A0A0C4DH72 117 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 KBTBD11-OT1A0A1B0GTJ5 212 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 LINC00854A0A1B0GVQ3 168 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 MEIS3P1A6NDR6 274 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 VWC2LB2RUY7 222 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 M0QYG6 137 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 SPINT2O43291 252 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 ADAM20O43506 726 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 PEX14O75381 377 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 B3GALNT1O75752 331 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 RBP4P02753 201 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 CTSDP07339 412 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 SPNP16150 400 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 RCC1P18754 421 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 MALP21145 153 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 GATA3P23771 443 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 ZBTB25P24278 435 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 GPR6P46095 362 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 GLIPR1P48060 266 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 CEBPDP49716 269 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 PDLIM4P50479 330 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 ARPC4P59998 168 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 RND3P61587 244 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 TSPAN5P62079 268 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 RNASE12Q5GAN4 147 aaKnown RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 METTL11BQ5VVY1 283 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 C11orf88Q6PI97 169 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 PRSS57Q6UWY2 283 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 IDO2Q6ZQW0 420 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 C1orf122Q6ZSJ8 110 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 KCTD9Q7L273 389 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 SLC25A42Q86VD7 318 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 H1FOOQ8IZA3 346 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 FAM185AQ8N0U4 392 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 PRR18Q8N4B5 295 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 C8orf31Q8N9H6 132 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 ASCC1Q8N9N2 400 aaKnown RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 BOLLQ8N9W6 283 aaKnown RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 DEFB108BQ8NET1 73 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 OR4D10Q8NGI6 311 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 ZNF596Q8TC21 504 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 ZFAND1Q8TCF1 268 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 CCDC107Q8WV48 283 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 MRGPRFQ96AM1 343 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 PPP1R14BQ96C90 147 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 CYYR1Q96J86 154 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 GINS4Q9BRT9 223 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 DCTN5Q9BTE1 182 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 CHMP1AQ9HD42 196 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 FAM212BQ9NTI7 297 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 BEX4Q9NWD9 120 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 MCUBQ9NWR8 336 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 EHFQ9NZC4 300 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 SLC25A10Q9UBX3 287 aaPredicted RBP4.51□□□□□ -1.69
VPS41-211ENST00000466017 CLN8Q9UBY8 286 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 SHPKQ9UHJ6 478 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 KIF25Q9UIL4 384 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 JPT1Q9UK76 154 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 OR2W1Q9Y3N9 320 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 KIAA2026Q5HYC2 2103 aa4.51□□□□□ -1.69
VPS41-211ENST00000466017 DSCAML1Q8TD84 2053 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 A0A087X0M5 115 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 PPIAL4CA0A0B4J2A2 164 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 PIGBOS1A0A0B4J2F0 54 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 A0A1B0GX30 115 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 A0A1W2PPH5 198 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 OR5H14A6NHG9 310 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 HMX3A6NHT5 357 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 C17orf98A8MV24 154 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 A8MXK9 166 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 C12orf77C9JDV5 145 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 PYCARD-AS1I3L0S3 204 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 SDCBPO00560 298 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 DVL1O14640 695 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 SSX4O60224 188 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 FCN3O75636 299 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 RGS11O94810 467 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 PPYP01298 95 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 HBZP02008 142 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 LIPFP07098 398 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 HLA-GP17693 338 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 CD34P28906 385 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 GNRHRP30968 328 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 FCGR2CP31995 323 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 CDKN1AP38936 164 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 BCAP31P51572 246 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 CCR6P51684 374 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 DLX6P56179 175 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 LOXL3P58215 753 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 TAS2R31P59538 309 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 GMFBP60983 142 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 HOXA4Q00056 320 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 ATXN7L3Q14CW9 347 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 HERPUD1Q15011 391 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 C17orf58Q2M2W7 97 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 CD300EQ496F6 205 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms