RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 LIN54Q6MZP7 749 aa9.01□□□□□ -0.97
CNOT4-208ENST00000465721 ZNF833PQ6ZTB9 187 aa9.01□□□□□ -0.97
CNOT4-208ENST00000465721 STX19Q8N4C7 294 aa9.01□□□□□ -0.97
CNOT4-208ENST00000465721 MRPL48Q96GC5 212 aaKnown RBP9.01□□□□□ -0.97
CNOT4-208ENST00000465721 TMEM138Q9NPI0 162 aa9.01□□□□□ -0.97
CNOT4-208ENST00000465721 ERVK13-1Q9NX77 482 aa9.01□□□□□ -0.97
CNOT4-208ENST00000465721 TRAPPC2LQ9UL33 140 aa9.01□□□□□ -0.97
CNOT4-208ENST00000465721 ING4Q9UNL4 249 aa9.01□□□□□ -0.97
CNOT4-208ENST00000465721 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
CNOT4-208ENST00000465721 ZNF93P35789 620 aaPredicted RBP9□□□□□ -0.97
CNOT4-208ENST00000465721 PPP1CCP36873 323 aaKnown RBP9□□□□□ -0.97
CNOT4-208ENST00000465721 SLC22A6Q4U2R8 563 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 MORN2Q502X0 79 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 ZNF660Q6AZW8 331 aaPredicted RBP9□□□□□ -0.97
CNOT4-208ENST00000465721 PYHIN1Q6K0P9 492 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 CD200R1LQ6Q8B3 271 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 TMEM106AQ96A25 262 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 FLYWCH2Q96CP2 140 aaKnown RBP9□□□□□ -0.97
CNOT4-208ENST00000465721 THAP7Q9BT49 309 aaPredicted RBP9□□□□□ -0.97
CNOT4-208ENST00000465721 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 FBXL15Q9H469 300 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 SPACA1Q9HBV2 294 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 PAK1IP1Q9NWT1 392 aaPredicted RBP9□□□□□ -0.97
CNOT4-208ENST00000465721 ETAA1Q9NY74 926 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 AASSQ9UDR5 926 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 JPT1Q9UK76 154 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 AP4S1Q9Y587 144 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 NUBP2Q9Y5Y2 271 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 A3GALT2U3KPV4 340 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 DNAH6Q9C0G6 4158 aa9□□□□□ -0.97
CNOT4-208ENST00000465721 SAA2-SAA4A0A096LPE2 208 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 SAC3D1A6NKF1 404 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 RRHO14718 337 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 ZNF780AO75290 641 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-208ENST00000465721 SC5DO75845 299 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 CD2P06729 351 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 SAA2P0DJI9 122 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-208ENST00000465721 FCGR1AP12314 374 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 GTF2F2P13984 249 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 ARSBP15848 533 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 GABRB1P18505 474 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 BDKRB2P30411 391 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 OR3A3P47888 321 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 GTF2A1P52655 376 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-208ENST00000465721 GBX2P52951 348 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-208ENST00000465721 TPPP2P59282 170 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 CX3CL1P78423 397 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 XAF1Q6GPH4 301 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 RAB12Q6IQ22 244 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 TRAT1Q6PIZ9 186 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 C5orf24Q7Z6I8 188 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 ANKRD13BQ86YJ7 626 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 OR52L2PQ8NGH6 319 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 GPR148Q8TDV2 347 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 ORAI1Q96D31 301 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 CENPNQ96H22 339 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-208ENST00000465721 RHOVQ96L33 236 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 MYCBPQ99417 103 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-208ENST00000465721 ELOVL1Q9BW60 279 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 IFI27L2Q9H2X8 130 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 TAF9BQ9HBM6 251 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 RETNQ9HD89 108 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 OR2S2Q9NQN1 319 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 MBNL3Q9NUK0 354 aaKnown RBP8.99□□□□□ -0.97
CNOT4-208ENST00000465721 GAB2Q9UQC2 676 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 GMPPBQ9Y5P6 360 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
CNOT4-208ENST00000465721 MCRIP1C9JLW8 97 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 ARPC1BO15143 372 aaKnown RBP8.98□□□□□ -0.97
CNOT4-208ENST00000465721 IFNA6P05013 189 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 ALPLP05186 524 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 PPP3R1P63098 170 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 RAB40BQ12829 278 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 ACTBL2Q562R1 376 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 FAM131AQ6UXB0 335 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 IL34Q6ZMJ4 242 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 S100A13Q99584 98 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 ZNF184Q99676 751 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-208ENST00000465721 FAM103A1Q9BTL3 118 aaKnown RBP8.98□□□□□ -0.97
CNOT4-208ENST00000465721 ERGIC3Q9Y282 383 aa8.98□□□□□ -0.97
CNOT4-208ENST00000465721 SNTNA6NMZ2 147 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 FCN1O00602 326 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 CA11O75493 328 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 RGS11O94810 467 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 FADS2O95864 444 aaKnown RBP8.97□□□□□ -0.97
CNOT4-208ENST00000465721 LIMS3P0CW19 117 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 LIMS4P0CW20 117 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 SNRPBP14678 240 aaKnown RBP8.97□□□□□ -0.97
CNOT4-208ENST00000465721 IGFBP3P17936 291 aaPredicted RBP8.97□□□□□ -0.97
CNOT4-208ENST00000465721 HTD2P86397 168 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 AKIRIN2Q53H80 203 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 FAM71F2Q6NXP2 309 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 ZNF554Q86TJ5 538 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 PPP1R27Q86WC6 154 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 OR52I1Q8NGK6 324 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 OR13C5Q8NGS8 318 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 MRPL30Q8TCC3 161 aaKnown RBP8.97□□□□□ -0.97
CNOT4-208ENST00000465721 ABHD5Q8WTS1 349 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 MS4A10Q96PG2 267 aa8.97□□□□□ -0.97
CNOT4-208ENST00000465721 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms