RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 C6orf62Q9GZU0 229 aaPredicted RBP13.72□□□□□ -0.21
VPS52-215ENST00000464425 MMP28Q9H239 520 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 TAF9BQ9HBM6 251 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 ELF5Q9UKW6 265 aaPredicted RBP13.72□□□□□ -0.21
VPS52-215ENST00000464425 CLPSL1A2RUU4 121 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 LY6LH3BQJ8 138 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 CHST1O43916 411 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 HLA-DQB1P01920 261 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 HBZP02008 142 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 FCGR3AP08637 254 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 CD24P25063 80 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 CEACAM3P40198 252 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 LOXL3P58215 753 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 GNG2P59768 71 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 HMGN3Q15651 99 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 TPTE2P1Q5T6R2 138 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 CCBE1Q6UXH8 406 aaPredicted RBP13.71□□□□□ -0.21
VPS52-215ENST00000464425 Q6ZS49 121 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 LAX1Q8IWV1 398 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 CREB3L1Q96BA8 519 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 ZNF747Q9BV97 191 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 RABL2AQ9UBK7 228 aaPredicted RBP13.71□□□□□ -0.21
VPS52-215ENST00000464425 RABL2BQ9UNT1 228 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 TCF19Q9Y242 345 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 MMP24Q9Y5R2 645 aa13.71□□□□□ -0.21
VPS52-215ENST00000464425 A6NDX4 124 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 DYNLT3P51808 116 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 HTD2P86397 168 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 IZUMO1Q8IYV9 350 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 OR10V1Q8NGI7 309 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 OR10X1Q8NGY0 326 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 LINC01006Q8NI28 216 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 SETD6Q8TBK2 473 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 RPEQ96AT9 228 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 GALMQ96C23 342 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 OCSTAMPQ9BR26 566 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 GFOD1Q9NXC2 390 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 GNG12Q9UBI6 72 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 EXTL2Q9UBQ6 330 aa13.7□□□□□ -0.22
VPS52-215ENST00000464425 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
VPS52-215ENST00000464425 A0A1B0GUS0 222 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 TRDCB7Z8K6 153 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 SSX5O60225 188 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 KIR2DS4P43632 304 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 CBX5P45973 191 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 DIAPH2-AS1Q14236 149 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 KIR2DS1Q14954 304 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 CNIH2Q6PI25 160 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 DTX3Q8N9I9 347 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 NUDCD2Q8WVJ2 157 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 DIRAS2Q96HU8 199 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 RAB18Q9NP72 206 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 MRPS7Q9Y2R9 242 aaKnown RBP13.69□□□□□ -0.22
VPS52-215ENST00000464425 RNF114Q9Y508 228 aa13.69□□□□□ -0.22
VPS52-215ENST00000464425 TSPAN9O75954 239 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 DIRAS3O95661 229 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 BRS3P32247 399 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 TNFSF8P32971 234 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 S100A5P33763 92 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 PRSS3P35030 304 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 ARHGDIBP52566 201 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 HLA-DRB3P79483 266 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 SRSF4Q08170 494 aaKnown RBP13.68□□□□□ -0.22
VPS52-215ENST00000464425 MADCAM1Q13477 382 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 Q3ZCU0 254 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 STEAP3Q658P3 488 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 LIAT1Q6ZQX7 453 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 TOMM40LQ969M1 308 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 C16orf95Q9H693 158 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 SCPEP1Q9HB40 452 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 OR2S2Q9NQN1 319 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 ZNF230Q9UIE0 474 aaPredicted RBP13.68□□□□□ -0.22
VPS52-215ENST00000464425 PITPNC1Q9UKF7 332 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 SIGLEC9Q9Y336 463 aa13.68□□□□□ -0.22
VPS52-215ENST00000464425 SULT1C2O00338 296 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 SLC31A2O15432 143 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 LY6G6FQ5SQ64 297 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 CCDC144NLQ6NUI1 221 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 SHISA2Q6UWI4 295 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 C8orf31Q8N9H6 132 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 OR52L2PQ8NGH6 319 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 OR4A4PQ8NGN8 299 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 OR4C13Q8NGP0 309 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 ST6GALNAC5Q9BVH7 336 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 NPFFR1Q9GZQ6 430 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 JPT1Q9UK76 154 aa13.67□□□□□ -0.22
VPS52-215ENST00000464425 OOSP1A8MZH6 123 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 LPLP06858 475 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 SCTP09683 121 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 PTHLHP12272 177 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 ZNF134P52741 427 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 GNMTQ14749 295 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 CNPY1Q3B7I2 92 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 FBLN7Q53RD9 439 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 HOGA1Q86XE5 327 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 CAPSLQ8WWF8 208 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 WFDC12Q8WWY7 111 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 ABHD1Q96SE0 405 aa13.66□□□□□ -0.22
VPS52-215ENST00000464425 SOSTQ9BQB4 213 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms