RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 AMBNQ9NP70 447 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 OR2S2Q9NQN1 319 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 ERGIC3Q9Y282 383 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 FBXO7Q9Y3I1 522 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 FAM90A7PA6NKC0 464 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 FAM90A23PA8MXZ1 464 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 ARPC1BO15143 372 aaKnown RBP13.31□□□□□ -0.28
HMGN1-210ENST00000464078 GLAP06280 429 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 PITPNAQ00169 270 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 GNMTQ14749 295 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 ZNF660Q6AZW8 331 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-210ENST00000464078 PYHIN1Q6K0P9 492 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 C19orf73Q9NVV2 129 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 KIAA1456Q9P272 454 aa13.31□□□□□ -0.28
HMGN1-210ENST00000464078 A0A1W2PN81 502 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 HSPA12AO43301 675 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 IGHV4-30-4P0DP06 118 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 FSTP19883 344 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 CHRNA7P36544 502 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 HTD2P86397 168 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 ECSCRQ19T08 205 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 FAM71F2Q6NXP2 309 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 CD200R1LQ6Q8B3 271 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 Q8N1Y9 231 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 SMIM19Q96E16 107 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 OR4C12Q96R67 309 aa13.3□□□□□ -0.28
HMGN1-210ENST00000464078 RPL36Q9Y3U8 105 aaKnown RBP13.3□□□□□ -0.28
HMGN1-210ENST00000464078 SAA2-SAA4A0A096LPE2 208 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 TRBV5-5A0A0J9YX44 114 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 YPEL1O60688 119 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 IGLV1-51P01701 117 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 SAA2P0DJI9 122 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-210ENST00000464078 PPP1CCP36873 323 aaKnown RBP13.29□□□□□ -0.28
HMGN1-210ENST00000464078 SRSF7Q16629 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
HMGN1-210ENST00000464078 CBR4Q8N4T8 237 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 OR52L2PQ8NGH6 319 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 PYDC1Q8WXC3 89 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 FLYWCH2Q96CP2 140 aaKnown RBP13.29□□□□□ -0.28
HMGN1-210ENST00000464078 ORAI1Q96D31 301 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 RDH12Q96NR8 316 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 FGF20Q9NP95 211 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-210ENST00000464078 KCNIP1Q9NZI2 227 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 CKLFQ9UBR5 152 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 STUB1Q9UNE7 303 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 PEX16Q9Y5Y5 336 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 TNCP24821 2201 aa13.29□□□□□ -0.28
HMGN1-210ENST00000464078 OGG1O15527 345 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 RGS11O94810 467 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 HSPB1P04792 205 aaKnown RBP13.28□□□□□ -0.28
HMGN1-210ENST00000464078 FUT3P21217 361 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 OR3A3P47888 321 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 CX3CL1P78423 397 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 LRRC36Q1X8D7 754 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 APH1BQ8WW43 257 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 MUL1Q969V5 352 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 Q96M66 194 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 IFI27L2Q9H2X8 130 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 NKX1-2Q9UD57 310 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-210ENST00000464078 NUBP2Q9Y5Y2 271 aa13.28□□□□□ -0.28
HMGN1-210ENST00000464078 TRAV8-7A0A075B6U6 113 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 RRHO14718 337 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 CIB2O75838 187 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 MGMTP16455 207 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 DCKP27707 260 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 TMEM267Q0VDI3 215 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-210ENST00000464078 Q499Y3 187 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 SIGIRRQ6IA17 410 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 GLIPR1L1Q6UWM5 242 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 TMPRSS11AQ6ZMR5 421 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 SGPP2Q8IWX5 399 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 CDH26Q8IXH8 852 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 OR2AK2Q8NG84 335 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 OR13C5Q8NGS8 318 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 MRPL30Q8TCC3 161 aaKnown RBP13.27□□□□□ -0.29
HMGN1-210ENST00000464078 CASTOR1Q8WTX7 329 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 SPATA25Q9BR10 227 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 SLA2Q9H6Q3 261 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 RNF150Q9ULK6 438 aa13.27□□□□□ -0.29
HMGN1-210ENST00000464078 OR5H14A6NHG9 310 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 H3BNX3 289 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 ATP5HO75947 161 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 MAS1P04201 325 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 EGR2P11161 476 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-210ENST00000464078 ETV1P50549 477 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 RPS11P62280 158 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN1-210ENST00000464078 AKIRIN2Q53H80 203 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 ACTBL2Q562R1 376 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 YIF1BQ5BJH7 314 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 C6orf141Q5SZD1 244 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 DMKNQ6E0U4 476 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-210ENST00000464078 AWAT2Q6E213 333 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 FAM131AQ6UXB0 335 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 JAGN1Q8N5M9 183 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 GHSRQ92847 366 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 ELOVL1Q9BW60 279 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 SELENOIQ9C0D9 397 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
HMGN1-210ENST00000464078 BABAM2Q9NXR7 383 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms